RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 LRRC14Q15048 493 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CYP27C1Q4G0S4 372 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 LLGL2Q6P1M3 1020 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 FAM214BQ7L5A3 538 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 TTC6Q86TZ1 520 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 NPAS4Q8IUM7 802 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 FOXP4Q8IVH2 680 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 RPAP2Q8IXW5 612 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 AMOTL1Q8IY63 956 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 ABI1Q8IZP0 508 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CLASRPQ8N2M8 674 aaKnown RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 GRIN3AQ8TCU5 1115 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 SH3RF3Q8TEJ3 882 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 SH3TC2Q8TF17 1288 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 KCNB2Q92953 911 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 SHISA4Q96DD7 197 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 MISP3Q96FF7 219 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 C12orf42Q96LP6 360 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 FEZ1Q99689 392 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 APBA2Q99767 749 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 DUSP23Q9BVJ7 150 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 C22orf23Q9BZE7 217 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CRNKL1Q9BZJ0 848 aaKnown RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 SH2D4AQ9H788 454 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 PAK6Q9NQU5 681 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-206ENST00000476045 CYP8B1Q9UNU6 501 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 NR2E3Q9Y5X4 410 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 ROBO3Q96MS0 1386 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 LTBP2Q14767 1821 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 LAMA4Q16363 1823 aa5.02□□□□□ -1.61
VPS13D-206ENST00000476045 ZNFX1Q9P2E3 1918 aaKnown RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 FANCGO15287 622 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ADCY3O60266 1144 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 CCL5P13501 91 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 EN2P19622 333 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 CYP7A1P22680 504 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 FLT3LGP49771 235 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 HERVK_113P62684 666 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 RPS26P62854 115 aaKnown RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 CAP1Q01518 475 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 SPP2Q13103 211 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ZBTB37Q5TC79 503 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 PCNX4Q63HM2 1172 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 LBX2Q6XYB7 198 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 UBE2Q1Q7Z7E8 422 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 AACSQ86V21 672 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 MAPKAPK5Q8IW41 473 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ZFPM1Q8IX07 1006 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 STK11IPQ8N1F8 1099 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ANKRD13CQ8N6S4 541 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 U2AF1L4Q8WU68 220 aaKnown RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 BCL7CQ8WUZ0 217 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 GPATCH3Q96I76 525 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 LNPKQ9C0E8 428 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ASCC2Q9H1I8 757 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-206ENST00000476045 TNKS2Q9H2K2 1166 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 DNAJC18Q9H819 358 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 IGSF5Q9NSI5 407 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 ZBTB40Q9NUA8 1239 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 SWAP70Q9UH65 585 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 U3KQE9 123 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 TTC28Q96AY4 2481 aa5.01□□□□□ -1.61
VPS13D-206ENST00000476045 MSCO60682 206 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 FBXO24O75426 580 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 IFIT2P09913 472 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 FAM87AP0C7U9 286 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 PDE6AP16499 860 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 ZKSCAN1P17029 563 aaPredicted RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 TAL1P17542 331 aaPredicted RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 CTGFP29279 349 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 COPB2P35606 906 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 RGS2P41220 211 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 OXCT1P55809 520 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 NUCB1Q02818 461 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 HABP4Q5JVS0 413 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 TREML2Q5T2D2 321 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 ANKRD45Q5TZF3 282 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 ZSCAN25Q6NSZ9 544 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 TATDN1Q6P1N9 297 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 TMEM179Q6ZVK1 233 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 ADGRA1Q86SQ6 560 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 CCAR1Q8IX12 1150 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 SMC5Q8IY18 1101 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 MB21D1Q8N884 522 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 AGBL5Q8NDL9 886 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 GPRC5AQ8NFJ5 357 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 TGFBRAP1Q8WUH2 860 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 LPAR1Q92633 364 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 EAF2Q96CJ1 260 aaPredicted RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 RIOK1Q9BRS2 568 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 XRN2Q9H0D6 950 aaKnown RBP eCLIP5□□□□□ -1.61
VPS13D-206ENST00000476045 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 CABP5Q9NP86 173 aa5□□□□□ -1.61
VPS13D-206ENST00000476045 PIH1D3Q9NQM4 214 aaKnown RBP5□□□□□ -1.61
VPS13D-206ENST00000476045 ATP8A2Q9NTI2 1148 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms