RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 DNAJC19Q96DA6 116 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 MTMR8Q96EF0 704 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 MBOAT7Q96N66 472 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 TMEM47Q9BQJ4 181 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 SELENOOQ9BVL4 669 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 TLR10Q9BXR5 811 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 ZNF341Q9BYN7 854 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 RASSF4Q9H2L5 321 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 FAM204AQ9H8W3 233 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 ABCF2Q9UG63 623 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 DMGDHQ9UI17 866 aaKnown RBP7.58□□□□□ -1.2
UBR4-212ENST00000475973 GGA2Q9UJY4 613 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 GUCA1BQ9UMX6 200 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 TRIM17Q9Y577 477 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 GAKO14976 1311 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 GPR75-ASB3A0A0A6YYF3 556 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 CCL15-CCL14A0A0B4J2E2 113 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 GRID2IPA4D2P6 1211 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 MYMKA6NI61 221 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 B4DLN1 442 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 EPHB6O15197 1021 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 TLR2O60603 784 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 COBLO75128 1261 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 NOL4O94818 638 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 CETPP11597 493 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 ANXA13P27216 316 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 IRAK1P51617 712 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 AMPD3Q01432 767 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 APBA1Q02410 837 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PPFIA1Q13136 1202 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 CRHR2Q13324 411 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 IRF5Q13568 498 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 TAF1CQ15572 869 aaPredicted RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 CCL15Q16663 113 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 INF2Q27J81 1249 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 KLHDC7AQ5VTJ3 777 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 HAUS3Q68CZ6 603 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PPP4R3AQ6IN85 833 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 IQCEQ6IPM2 695 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PDXDC1Q6P996 788 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 CDAN1Q8IWY9 1227 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 SUGP1Q8IWZ8 645 aaKnown RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 AFAP1L1Q8TED9 768 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 FAM151AQ8WW52 585 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 SECISBP2LQ93073 1101 aaKnown RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 TRIM47Q96LD4 638 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 OSBPL9Q96SU4 736 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 NDST4Q9H3R1 872 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 KAT14Q9H8E8 782 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 ZFYVE28Q9HCC9 887 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
UBR4-212ENST00000475973 AIPL1Q9NZN9 384 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 PCDHA13Q9Y5I0 950 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 CAPN6Q9Y6Q1 641 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 DUSP10Q9Y6W6 482 aa7.57□□□□□ -1.2
UBR4-212ENST00000475973 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
UBR4-212ENST00000475973 A0A087WUV0 522 aaPredicted RBP7.56□□□□□ -1.2
UBR4-212ENST00000475973 CCDC194A0A1B0GVG4 234 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 POTEB3A0JP26 581 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 TSPY2A6NKD2 308 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 GOLGA8KD6RF30 607 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 ENC1O14682 589 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 SRGAP2O75044 1071 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 TACC1O75410 805 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 GNA11P29992 359 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 GGCXP38435 758 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 KLK7P49862 253 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 RHBDL3P58872 404 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
UBR4-212ENST00000475973 GSTO1P78417 241 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 SP3Q02447 781 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 PPATQ06203 517 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 GABPAQ06546 454 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 TCP10Q12799 353 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 KIF5AQ12840 1032 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 PPIL2Q13356 520 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 KIF22Q14807 665 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 NONOQ15233 471 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBR4-212ENST00000475973 HSP90B2PQ58FF3 399 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 CDC42EP5Q6NZY7 148 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 POTEBQ6S5H4 581 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 LEKR1Q6ZMV7 388 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 NEK8Q86SG6 692 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 TRIM59Q8IWR1 403 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 OLIG1Q8TAK6 271 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 RASGRP4Q8TDF6 673 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 CRYGNQ8WXF5 182 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 BRI3BPQ8WY22 251 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms