RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	KRT85	P78386	507 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	MLLT1	Q03111	559 aa	Predicted RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	FAAP100	Q0VG06	881 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	CTTN	Q14247	550 aa	Known RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	GRIK4	Q16099	956 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	ZNF484	Q5JVG2	852 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	KRT79	Q5XKE5	535 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	GDF6	Q6KF10	455 aa	Predicted RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	LOXHD1	Q8IVV2	1947 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	C4orf19	Q8IY42	314 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	C7orf61	Q8IZ16	206 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	LMBR1	Q8WVP7	490 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	AK8	Q96MA6	479 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	TRPV6	Q9H1D0	765 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	TUFT1	Q9NNX1	390 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	TRMT13	Q9NUP7	481 aa	Known RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	CHMP5	Q9NZZ3	219 aa		11.22	□□□□□ -0.61
DMD-223	ENST00000475732	SRPRB	Q9Y5M8	271 aa	Known RBP	11.22	□□□□□ -0.61
DMD-223	ENST00000475732	DDX11L8	A8MPP1	907 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	PPP6R2	O75170	966 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	MED24	O75448	989 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	LYPLA2	O95372	231 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	SPATA31C1	P0DKV0	1188 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	MUT	P22033	750 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	CCT6A	P40227	531 aa	Known RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	IGBP1	P78318	339 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	ADAM17	P78536	824 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	ZNF200	P98182	395 aa	Predicted RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	HIC1	Q14526	733 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	OTUD6A	Q7L8S5	288 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	CATSPER3	Q86XQ3	398 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	KRI1	Q8N9T8	703 aa	Known RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	KCNG4	Q8TDN1	519 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	SNX29	Q8TEQ0	813 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	NIFK	Q9BYG3	293 aa	Known RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	TMEM39A	Q9NV64	488 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	PRKAG2	Q9UGJ0	569 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	TUBE1	Q9UJT0	475 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	FBXO2	Q9UK22	296 aa	Predicted RBP	11.21	□□□□□ -0.61
DMD-223	ENST00000475732	NR2E3	Q9Y5X4	410 aa		11.21	□□□□□ -0.61
DMD-223	ENST00000475732	ARID2	Q68CP9	1835 aa		11.21	□□□□□ -0.62
DMD-223	ENST00000475732	KDM3A	Q9Y4C1	1321 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.2	□□□□□ -0.62
DMD-223	ENST00000475732	PP2D1	A8MPX8	630 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	RIOK3	O14730	519 aa	Known RBP	11.2	□□□□□ -0.62
DMD-223	ENST00000475732	TREH	O43280	583 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	STBD1	O95210	358 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	CDC25A	P30304	524 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	YWHAB	P31946	246 aa	Known RBP	11.2	□□□□□ -0.62
DMD-223	ENST00000475732	UBA7	P41226	1012 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	GRIN1	Q05586	938 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	PTK7	Q13308	1070 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	MARCH8	Q5T0T0	291 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	ANO5	Q75V66	913 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	CCDC155	Q8N6L0	562 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	TRAPPC12	Q8WVT3	735 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	SPATA32	Q96LK8	384 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	NACC1	Q96RE7	527 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	CSRNP2	Q9H175	543 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.2	□□□□□ -0.62
DMD-223	ENST00000475732	PDLIM7	Q9NR12	457 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	RCOR1	Q9UKL0	485 aa		11.2	□□□□□ -0.62
DMD-223	ENST00000475732	ZBTB42	B2RXF5	422 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	MAGEB2	O15479	319 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	SLC26A4	O43511	780 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CUTA	O60888	179 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CYP2C9	P11712	490 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	XRCC6	P12956	609 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	KLRC1	P26715	233 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	ME1	P48163	572 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	TBC1D8B	Q0IIM8	1120 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	TARBP2	Q15633	366 aa	Known RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	MTERF2	Q49AM1	385 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	XKR9	Q5GH70	373 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	TAF2	Q6P1X5	1199 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	MTHFD1L	Q6UB35	978 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	SH3RF1	Q7Z6J0	888 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CABP7	Q86V35	215 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	SERINC5	Q86VE9	423 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	KCTD17	Q8N5Z5	321 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CALML4	Q96GE6	196 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CDK5RAP3	Q96JB5	506 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CCDC43	Q96MW1	224 aa	Known RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CLIC6	Q96NY7	704 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CTAGE1	Q96RT6	745 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	MMTAG2	Q9BU76	263 aa	Known RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	NT5C3A	Q9H0P0	336 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	CYP26B1	Q9NR63	512 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	ANKEF1	Q9NU02	776 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	DDX19A	Q9NUU7	478 aa	Known RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	TBX21	Q9UL17	535 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	KIAA1024	Q9UPX6	916 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	PPME1	Q9Y570	386 aa		11.19	□□□□□ -0.62
DMD-223	ENST00000475732	TNRC18	O15417	2968 aa	Predicted RBP	11.19	□□□□□ -0.62
DMD-223	ENST00000475732	PDE4DIP	Q5VU43	2346 aa		11.18	□□□□□ -0.62
DMD-223	ENST00000475732	TMEM150B	A6NC51	233 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms