RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 ZFP42Q96MM3 310 aa15.26■□□□□ 0.03
SSPO-205ENST00000475488 ING2Q9H160 280 aa15.26■□□□□ 0.03
SSPO-205ENST00000475488 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
SSPO-205ENST00000475488 ABCC12Q96J65 1359 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 MAP2K2P36507 400 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 ABTB1Q969K4 478 aaPredicted RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 PHF21AQ96BD5 680 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 EDC3Q96F86 508 aaKnown RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 GREM2Q9H772 168 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 SMARCA1P28370 1054 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 PCDHA5Q9Y5H7 936 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 UBA6A0AVT1 1052 aaPredicted RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 RLBP1P12271 317 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 MAP4P27816 1152 aaKnown RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 PEX19P40855 299 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 CCDC157Q569K6 752 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 NBPF10Q6P3W6 841 aaKnown RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 ACAD11Q709F0 780 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 BCAS4Q8TDM0 211 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 PEX3P56589 373 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 RASSF3Q86WH2 238 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
SSPO-205ENST00000475488 AARSP49588 968 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSPO-205ENST00000475488 AP1B1Q10567 949 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 SERPINB13Q9UIV8 391 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 KIF28PB7ZC32 967 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 GPC3P51654 580 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 RAPGEF5Q92565 580 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 CLIC4Q9Y696 253 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
SSPO-205ENST00000475488 CYBBP04839 570 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 RAD51Q06609 339 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 ZNF699Q32M78 642 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 ZNF667Q5HYK9 610 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 RASGRP4Q8TDF6 673 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 C6orf203Q9P0P8 240 aaPredicted RBP15.24■□□□□ 0.03
SSPO-205ENST00000475488 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
SSPO-205ENST00000475488 BBOX1O75936 387 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 FGAP02671 866 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 RALAP11233 206 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 CUL1Q13616 776 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 ZNF568Q3ZCX4 644 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 SDE2Q6IQ49 451 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 KLHL29Q96CT2 875 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 EPB41L5Q9HCM4 733 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 MAP10Q9P2G4 905 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 CENPAP49450 140 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 STRIP2Q9ULQ0 834 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 TRIM33Q9UPN9 1127 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 NUP160Q12769 1436 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 NDUFA8P51970 172 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
SSPO-205ENST00000475488 ALCAMQ13740 583 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 KRT72Q14CN4 511 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 OR9Q1Q8NGQ5 310 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 HEY1Q9Y5J3 304 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 CCDC151A5D8V7 595 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 SPDYE5A6NIY4 337 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 ST8SIA6P61647 398 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 SPDYE7PQ495Y7 208 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 PBKQ96KB5 322 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 MED21Q13503 144 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 FAM133BQ5BKY9 247 aaKnown RBP15.24■□□□□ 0.03
SSPO-205ENST00000475488 PKN3Q6P5Z2 889 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 RNF135Q8IUD6 432 aa15.24■□□□□ 0.03
SSPO-205ENST00000475488 DHTKD1Q96HY7 919 aaPredicted RBP15.24■□□□□ 0.03
SSPO-205ENST00000475488 E9PMD0 336 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 F5H423 210 aaPredicted RBP15.23■□□□□ 0.03
SSPO-205ENST00000475488 CLDN3O15551 220 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 KRT8P05787 483 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 RBM6P78332 1123 aaKnown RBP15.23■□□□□ 0.03
SSPO-205ENST00000475488 C16orf72Q14CZ0 275 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 BBS9Q3SYG4 887 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 MFN1Q8IWA4 741 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 ANKRD13CQ8N6S4 541 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 MTIF3Q9H2K0 278 aaKnown RBP15.23■□□□□ 0.03
SSPO-205ENST00000475488 FANCLQ9NW38 375 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 MXI1P50539 228 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 COPS2P61201 443 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 ZSCAN26Q16670 478 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 SH3TC2Q8TF17 1288 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 ESRRAP11474 423 aaPredicted RBP15.23■□□□□ 0.03
SSPO-205ENST00000475488 CXCR5P32302 372 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 UBE2SQ16763 222 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 SYTL3Q4VX76 610 aa15.23■□□□□ 0.03
SSPO-205ENST00000475488 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms