RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 EPOPA6NHQ4 379 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 DDX39AO00148 427 aaKnown RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 ATP4AP20648 1035 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 CYP3A7P24462 503 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 MIS18BP1Q6P0N0 1132 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 RSPH3Q86UC2 560 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 SMAP1Q8IYB5 467 aaPredicted RBP17.6■□□□□ 0.41
CPSF3-203ENST00000475482 BLIDQ8IZY5 108 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 TMEM87AQ8NBN3 555 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 MBOAT7Q96N66 472 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
CPSF3-203ENST00000475482 TCHHQ07283 1943 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 COL4A6Q14031 1691 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 COL1A2P08123 1366 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 ZBTB42B2RXF5 422 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 MSH4O15457 936 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 HBP1O60381 514 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 KRT76Q01546 638 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 LPIN1Q14693 890 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 FBXO47Q5MNV8 452 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 MOXD1Q6UVY6 613 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 SPRED2Q7Z698 418 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 NOSTRINQ8IVI9 506 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
CPSF3-203ENST00000475482 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 TRAPPC12Q8WVT3 735 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 ZBTB10Q96DT7 871 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
CPSF3-203ENST00000475482 ZNF302Q9NR11 478 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 TRPC6Q9Y210 931 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 SQORQ9Y6N5 450 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 TTC28Q96AY4 2481 aa17.59■□□□□ 0.41
CPSF3-203ENST00000475482 REV3LO60673 3130 aa17.58■□□□□ 0.41
CPSF3-203ENST00000475482 KDM3AQ9Y4C1 1321 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 LPXNO60711 386 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
CPSF3-203ENST00000475482 AMHP03971 560 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 IGBP1P78318 339 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 MRPS6P82932 125 aaKnown RBP17.58■□□□□ 0.4
CPSF3-203ENST00000475482 Q4G0T1 1027 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 SWSAP1Q6NVH7 229 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 SLC5A5Q92911 643 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 UIMC1Q96RL1 719 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 RIT2Q99578 217 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 ZBED2Q9BTP6 218 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 GJB4Q9NTQ9 266 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 INSL6Q9Y581 213 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 PCDHA10Q9Y5I2 948 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 CDY2AQ9Y6F7 541 aa17.58■□□□□ 0.4
CPSF3-203ENST00000475482 RFXAPO00287 272 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 BACH1O14867 736 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 MBD3O95983 291 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 GHRP10912 638 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 ERVK-21P61565 698 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 RILPL1Q5EBL4 403 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 IER5Q5VY09 327 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 PDXDC2PQ6P474 469 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 B3GNT9Q6UX72 402 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 MYOCDQ8IZQ8 938 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 NME8Q8N427 588 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
CPSF3-203ENST00000475482 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
CPSF3-203ENST00000475482 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 NCOR1O75376 2440 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 COL4A4P53420 1690 aaPredicted RBP17.56■□□□□ 0.4
CPSF3-203ENST00000475482 LINC01553A4QN01 128 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 BTBD18B2RXH4 712 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 DLL1O00548 723 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 PSMD10O75832 226 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 PSAPP07602 524 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 IGFBP4P22692 258 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 KLRC1P26715 233 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 BBXQ8WY36 941 aaPredicted RBP17.56■□□□□ 0.4
CPSF3-203ENST00000475482 ARNTL2Q8WYA1 636 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 AGO3Q9H9G7 860 aaKnown RBP17.56■□□□□ 0.4
CPSF3-203ENST00000475482 CERS4Q9HA82 394 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 BRWD1Q9NSI6 2320 aa17.56■□□□□ 0.4
CPSF3-203ENST00000475482 GOLGA6L4A6NEF3 574 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 KRT25Q7Z3Z0 450 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 CRIPAKQ8N1N5 446 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
CPSF3-203ENST00000475482 TGS1Q96RS0 853 aaKnown RBP17.55■□□□□ 0.4
CPSF3-203ENST00000475482 CELF4Q9BZC1 486 aaKnown RBP17.55■□□□□ 0.4
CPSF3-203ENST00000475482 FAM49AQ9H0Q0 323 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms