RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 MNS1Q8NEH6 495 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 METTL14Q9HCE5 456 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 MYO1AQ9UBC5 1043 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 UBE4BO95155 1302 aa16.9■□□□□ 0.3
RPUSD3-215ENST00000475470 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 AKAP3O75969 853 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 LYPLA2O95372 231 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 RARRES1P49788 294 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 KIAA1328Q86T90 577 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 BAP1Q92560 729 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 FIZ1Q96SL8 496 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 CEP72Q9P209 647 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 MAFGO15525 162 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 PSMC5P62195 406 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 HERVK_113P62684 666 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 GUCA1BQ9UMX6 200 aa16.89■□□□□ 0.29
RPUSD3-215ENST00000475470 ZMYM2Q9UBW7 1377 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 CCNE2O96020 404 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 MAPK7Q13164 816 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 DCAF17Q5H9S7 520 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 KSR1Q8IVT5 923 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 SLC35F6Q8N357 371 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 NUCKS1Q9H1E3 243 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 DEF6Q9H4E7 631 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 MYH11P35749 1972 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 CASP4P49662 377 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 SPA17Q15506 151 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 UGCGQ16739 394 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 CCDC122Q5T0U0 273 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 DAW1Q8N136 415 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 INPP4AQ96PE3 977 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 CARD6Q9BX69 1037 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 ARHGAP20Q9P2F6 1191 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 LARSQ9P2J5 1176 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 MRFAP1Q9Y605 127 aa16.88■□□□□ 0.29
RPUSD3-215ENST00000475470 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 CTAGE9A4FU28 777 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 USO1O60763 962 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 NOL4O94818 638 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 POLR2FP61218 127 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 NFIL3Q16649 462 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 TREML2Q5T2D2 321 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 TCERG1LQ5VWI1 586 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 C9orf131Q5VYM1 1079 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 ZNF746Q6NUN9 644 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 LRRN4CLQ8ND94 238 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 RDM1Q8NG50 284 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 MAF1Q9H063 256 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 IKZF4Q9H2S9 585 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 K7ENM7 598 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 ELF2Q15723 593 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 UTP14CQ5TAP6 766 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 SYCP3Q8IZU3 236 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 JAKMIP2Q96AA8 810 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 GBP3Q9H0R5 595 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 TRIM10Q9UDY6 481 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 PCDHA10Q9Y5I2 948 aa16.87■□□□□ 0.29
RPUSD3-215ENST00000475470 KRT86O43790 486 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 EIF4A3P38919 411 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 CYP27A1Q02318 531 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 PDCL2Q8N4E4 241 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 CDHR1Q96JP9 859 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 SH2D3AQ9BRG2 576 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 AKR1B10O60218 316 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 STAM2O75886 525 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 YBX3P16989 372 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■□□□ 12
RPUSD3-215ENST00000475470 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 XKR9Q5GH70 373 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 SFMBT2Q5VUG0 894 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 FAM186BQ8IYM0 893 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 CHST13Q8NET6 341 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 GOLGA5Q8TBA6 731 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 SENP7Q9BQF6 1050 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
RPUSD3-215ENST00000475470 TFR2Q9UP52 801 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms