RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 CYFIP1Q7L576 1253 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 ADGRF4Q8IZF3 695 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 SIX5Q8N196 739 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 DNAJB3Q8WWF6 145 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 LINC01599Q8WXQ3 324 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 RIN2Q8WYP3 895 aaPredicted RBP7.8□□□□□ -1.16
LSAMP-204ENST00000475403 FAM49AQ9H0Q0 323 aaPredicted RBP7.8□□□□□ -1.16
LSAMP-204ENST00000475403 ADAM7Q9H2U9 754 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 YY1AP1Q9H869 796 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 TCP11L1Q9NUJ3 509 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 CDH22Q9UJ99 828 aa7.8□□□□□ -1.16
LSAMP-204ENST00000475403 CDV3Q9UKY7 258 aaKnown RBP7.8□□□□□ -1.16
LSAMP-204ENST00000475403 KMT2BQ9UMN6 2715 aaPredicted RBP7.8□□□□□ -1.16
LSAMP-204ENST00000475403 ZNF292O60281 2723 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 DENND3A2RUS2 1198 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 FSCN2O14926 492 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 PI15O43692 258 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 SNHG28P0DPA3 235 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 LAG3P18627 525 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 MARK3P27448 753 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 HOXA13P31271 388 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 HSD17B4P51659 736 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 IGBP1P78318 339 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 MRPS6P82932 125 aaKnown RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 KRT17Q04695 432 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 MGAT3Q09327 533 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 BMS1Q14692 1282 aaKnown RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 GRIK4Q16099 956 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 KIAA0319Q5VV43 1072 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 FCHSD1Q86WN1 690 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ZDHHC14Q8IZN3 488 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ZNF710Q8N1W2 664 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 COLGALT1Q8NBJ5 622 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 RASGRP4Q8TDF6 673 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ANKRD7Q92527 254 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 GPKOWQ92917 476 aaPredicted RBP eCLIP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 SECISBP2LQ93073 1101 aaKnown RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ACSF2Q96CM8 615 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ZFP91Q96JP5 570 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 TTC14Q96N46 770 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 GPR20Q99678 358 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 AMNQ9BXJ7 453 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 RWDD1Q9H446 243 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 KAT14Q9H8E8 782 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 VAT1LQ9HCJ6 419 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 NGRNQ9NPE2 291 aaKnown RBP7.79□□□□□ -1.16
LSAMP-204ENST00000475403 CYP26B1Q9NR63 512 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 NCDNQ9UBB6 729 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 ANAPC4Q9UJX5 808 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 DDX19BQ9UMR2 479 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 PCDHA1Q9Y5I3 950 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 CEP250Q9BV73 2442 aa7.79□□□□□ -1.16
LSAMP-204ENST00000475403 CFAP47Q6ZTR5 3102 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 KINO60870 393 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 PARP1P09874 1014 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 WEE2P0C1S8 567 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 PPM1AP35813 382 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 SARSP49591 514 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 NUCB2P80303 420 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 TMEM62Q0P6H9 643 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 NFX1Q12986 1120 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 TDGQ13569 410 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 SMC1AQ14683 1233 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 SPECC1Q5M775 1068 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 ZMYM1Q5SVZ6 1142 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 XRRA1Q6P2D8 792 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 MFSD6Q6ZSS7 791 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 IL31RAQ8NI17 732 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 PIBF1Q8WXW3 757 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 MRPS27Q92552 414 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 GLG1Q92896 1179 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 AGO3Q9H9G7 860 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 ERVK-5Q9HDB9 667 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 SPTLC3Q9NUV7 552 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 MAP3K20Q9NYL2 800 aaKnown RBP7.78□□□□□ -1.16
LSAMP-204ENST00000475403 PADI3Q9ULW8 664 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 DUSP12Q9UNI6 340 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 LZTS1Q9Y250 596 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 TRPV2Q9Y5S1 764 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 DOCK5Q9H7D0 1870 aa7.78□□□□□ -1.16
LSAMP-204ENST00000475403 WDR87Q6ZQQ6 2873 aa7.77□□□□□ -1.16
LSAMP-204ENST00000475403 SPTBN2O15020 2390 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 HIDE1A8MVS5 230 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 GCOM1H8Y6P7 765 aaPredicted RBP7.77□□□□□ -1.17
LSAMP-204ENST00000475403 FIBPO43427 364 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 STAM2O75886 525 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 EOMESO95936 686 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 POLR2MP0CAP2 368 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 HAND2P61296 217 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 ADAM17P78536 824 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 DMWDQ09019 674 aa7.77□□□□□ -1.17
LSAMP-204ENST00000475403 KIAA1841Q6NSI8 718 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms