RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MYL10Q9BUA6 226 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 TMX1Q9H3N1 280 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 LY9Q9HBG7 655 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 KCNH7Q9NS40 1196 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 LZTS1Q9Y250 596 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 TRIOO75962 3097 aa14.39□□□□□ -0.11
SKA3-206ENST00000475251 PER2O15055 1255 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 HOXB8P17481 243 aaPredicted RBP14.38□□□□□ -0.11
SKA3-206ENST00000475251 IBSPP21815 317 aaPredicted RBP14.38□□□□□ -0.11
SKA3-206ENST00000475251 AVPR2P30518 371 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 GATMP50440 423 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 ANTXR2P58335 489 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 PTH1RQ03431 593 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 UBE2SQ16763 222 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 TTC22Q5TAA0 569 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
SKA3-206ENST00000475251 RASGRP4Q8TDF6 673 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 TRAPPC12Q8WVT3 735 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 ZBTB10Q96DT7 871 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 ASIC4Q96FT7 647 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 TMEM87BQ96K49 555 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 ADAM2Q99965 735 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 ERVK-5Q9HDB9 667 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
SKA3-206ENST00000475251 RGS18Q9NS28 235 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 GINS2Q9Y248 185 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 NR2E1Q9Y466 385 aa14.38□□□□□ -0.11
SKA3-206ENST00000475251 COL1A2P08123 1366 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 FSCN2O14926 492 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 HOXA2O43364 376 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 HBP1O60381 514 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 PLEKHA8P1O95397 391 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 FOSP01100 380 aaPredicted RBP14.37□□□□□ -0.11
SKA3-206ENST00000475251 KLRC1P26715 233 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 MCM5P33992 734 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 PPM1AP35813 382 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 TECP42680 631 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 FOXK2Q01167 660 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 TMEM266Q2M3C6 531 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 FAM160B1Q5W0V3 765 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 ANKRD54Q6NXT1 300 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 COLGALT1Q8NBJ5 622 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 MRPS27Q92552 414 aaKnown RBP14.37□□□□□ -0.11
SKA3-206ENST00000475251 ELAC1Q9H777 363 aaKnown RBP14.37□□□□□ -0.11
SKA3-206ENST00000475251 ATP6V0A4Q9HBG4 840 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 TMEM161AQ9NX61 479 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 PCDHGC5Q9Y5F6 944 aa14.37□□□□□ -0.11
SKA3-206ENST00000475251 FNDC1Q4ZHG4 1894 aaPredicted RBP14.37□□□□□ -0.11
SKA3-206ENST00000475251 C9IYK1 514 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 BACH1O14867 736 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 PRC1O43663 620 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 ATG7O95352 703 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 GSPT1P15170 499 aaKnown RBP14.36□□□□□ -0.11
SKA3-206ENST00000475251 CHMLP26374 656 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 LIFRP42702 1097 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
SKA3-206ENST00000475251 ERVFC1P60507 584 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 KRT17Q04695 432 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 TPRNQ4KMQ1 711 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 UBALD2Q8IYN6 164 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 MAP4K1Q92918 833 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 NECTIN4Q96NY8 510 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 TYW1Q9NV66 732 aaKnown RBP14.36□□□□□ -0.11
SKA3-206ENST00000475251 ST3GAL5Q9UNP4 418 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
SKA3-206ENST00000475251 SLC12A7Q9Y666 1083 aa14.36□□□□□ -0.11
SKA3-206ENST00000475251 SH2B2O14492 632 aaPredicted RBP14.35□□□□□ -0.11
SKA3-206ENST00000475251 SGSM2O43147 1006 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 MGEA5O60502 916 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 MTMR3Q13615 1198 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 BMS1Q14692 1282 aaKnown RBP14.35□□□□□ -0.11
SKA3-206ENST00000475251 FAM102BQ5T8I3 360 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 PLPP4Q5VZY2 271 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 CES5AQ6NT32 575 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 ABI1Q8IZP0 508 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 CMTR1Q8N1G2 835 aaKnown RBP14.35□□□□□ -0.11
SKA3-206ENST00000475251 VN1R2Q8NFZ6 395 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 CASP10Q92851 521 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 TMEM117Q9H0C3 514 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 S1PR5Q9H228 398 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
SKA3-206ENST00000475251 TAF6LQ9Y6J9 622 aa14.35□□□□□ -0.11
SKA3-206ENST00000475251 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 HAX1O00165 279 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 PDE4AP27815 886 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 ZNF76P36508 570 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 CRYBB1P53674 252 aaPredicted RBP14.34□□□□□ -0.11
SKA3-206ENST00000475251 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
SKA3-206ENST00000475251 ITIH3Q06033 890 aa14.34□□□□□ -0.11
SKA3-206ENST00000475251 KCNC3Q14003 757 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms