RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 TRMT1LQ7Z2T5 733 aaKnown RBP20.26■□□□□ 0.83
EFNA1-204ENST00000474413 LINC01599Q8WXQ3 324 aa20.26■□□□□ 0.83
EFNA1-204ENST00000474413 CDX2Q99626 313 aaPredicted RBP20.26■□□□□ 0.83
EFNA1-204ENST00000474413 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
EFNA1-204ENST00000474413 AGO3Q9H9G7 860 aaKnown RBP20.26■□□□□ 0.83
EFNA1-204ENST00000474413 TCEAL9Q9UHQ7 104 aa20.26■□□□□ 0.83
EFNA1-204ENST00000474413 PCDHA11Q9Y5I1 949 aa20.26■□□□□ 0.83
EFNA1-204ENST00000474413 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 LCHNA4D1U4 455 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 RAB30Q15771 203 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 CKAP2LQ8IYA6 745 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 BANK1Q8NDB2 785 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 PHOSPHO2Q8TCD6 241 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 MTMR9Q96QG7 549 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 IFIH1Q9BYX4 1025 aaKnown RBP20.25■□□□□ 0.83
EFNA1-204ENST00000474413 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 CDHR5Q9HBB8 845 aa20.25■□□□□ 0.83
EFNA1-204ENST00000474413 CA3P07451 260 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 CLCN3P51790 818 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 MYLIPQ8WY64 445 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 FAM167AQ96KS9 214 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 NAP1L4Q99733 375 aaKnown RBP20.24■□□□□ 0.83
EFNA1-204ENST00000474413 FOXP1Q9H334 677 aaPredicted RBP20.24■□□□□ 0.83
EFNA1-204ENST00000474413 TRPV2Q9Y5S1 764 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 KDM3AQ9Y4C1 1321 aa20.24■□□□□ 0.83
EFNA1-204ENST00000474413 IKBKEQ14164 716 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 NBR1Q14596 966 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 TSHZ1Q6ZSZ6 1077 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 ANO5Q75V66 913 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 SEPT8Q92599 483 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 SH2D3AQ9BRG2 576 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 STXBP5LQ9Y2K9 1186 aa20.23■□□□□ 0.83
EFNA1-204ENST00000474413 UNC80Q8N2C7 3258 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 NEMFO60524 1076 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 GJB5O95377 273 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.831e-12■□□□□ 8.8
EFNA1-204ENST00000474413 CD52P31358 61 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 KCNJ6P48051 423 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 DRP2Q13474 957 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 PLA2G4FQ68DD2 849 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 RSPH3Q86UC2 560 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 ZNF579Q8NAF0 562 aaKnown RBP20.22■□□□□ 0.83
EFNA1-204ENST00000474413 TNPO1Q92973 898 aaKnown RBP20.22■□□□□ 0.83
EFNA1-204ENST00000474413 NIFKQ9BYG3 293 aaKnown RBP20.22■□□□□ 0.83
EFNA1-204ENST00000474413 CELF4Q9BZC1 486 aaKnown RBP20.22■□□□□ 0.83
EFNA1-204ENST00000474413 RGL1Q9NZL6 768 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
EFNA1-204ENST00000474413 EPOPA6NHQ4 379 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 GPR32O75388 356 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 VTNP04004 478 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
EFNA1-204ENST00000474413 CALCRLQ16602 461 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 XKR3Q5GH77 459 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 NCAPH2Q6IBW4 605 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 FAM184AQ8NB25 1140 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 PPP1R16BQ96T49 567 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 TMX1Q9H3N1 280 aa20.21■□□□□ 0.83
EFNA1-204ENST00000474413 SEPT9Q9UHD8 586 aaPredicted RBP20.21■□□□□ 0.83
EFNA1-204ENST00000474413 IGKV6-21A0A0C4DH24 114 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 EFCAB14O75071 495 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 GJB2P29033 226 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 MCM7P33993 719 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 PSMC5P62195 406 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 TAP1Q03518 808 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 CUL4AQ13619 759 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 ADGRE1Q14246 886 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 SAFBQ15424 915 aaKnown RBP eCLIP20.2■□□□□ 0.82
EFNA1-204ENST00000474413 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 PPP2R2DQ66LE6 453 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 FAM117BQ6P1L5 589 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 SLFN12Q8IYM2 578 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 DYDC2Q96IM9 177 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 LXNQ9BS40 222 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 PRDM12Q9H4Q4 367 aa20.2■□□□□ 0.82
EFNA1-204ENST00000474413 ZBTB39O15060 712 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
EFNA1-204ENST00000474413 QARSP47897 775 aaKnown RBP20.19■□□□□ 0.82
EFNA1-204ENST00000474413 MCM2P49736 904 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 HTRA4P83105 476 aaPredicted RBP20.19■□□□□ 0.82
EFNA1-204ENST00000474413 EPHA7Q15375 998 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 TMEM266Q2M3C6 531 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 MTERF2Q49AM1 385 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 IER5Q5VY09 327 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 RTN4RL1Q86UN2 441 aaPredicted RBP20.19■□□□□ 0.82
EFNA1-204ENST00000474413 MYOCDQ8IZQ8 938 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 CRIPAKQ8N1N5 446 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 C4orf32Q8N8J7 132 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 APBB2Q92870 758 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 ADAMTS10Q9H324 1103 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 SLC28A3Q9HAS3 691 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 ERVK-5Q9HDB9 667 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 PADI3Q9ULW8 664 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 SQORQ9Y6N5 450 aa20.19■□□□□ 0.82
EFNA1-204ENST00000474413 SPTBN5Q9NRC6 3674 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms