RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RAD54LQ92698 747 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 FAM167BQ9BTA0 163 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 IL17RBQ9NRM6 502 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 STK38LQ9Y2H1 464 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 ZNF804BA4D1E1 1349 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ACTN1P12814 892 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 COPS2P61201 443 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 BNIP1Q12981 228 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 UBAP2Q5T6F2 1119 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 KCNK18Q7Z418 384 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 HES6Q96HZ4 224 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 USP15Q9Y4E8 981 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 LAMB1P07942 1786 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 A6NHS1 94 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 AGTP01019 485 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 MSH2P43246 934 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 PTENP60484 403 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 THEMIS2Q5TEJ8 643 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 CEP63Q96MT8 703 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ERP44Q9BS26 406 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 FGFBP2Q9BYJ0 223 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ARHGEF10LQ9HCE6 1279 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ETAA1Q9NY74 926 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 ADAM22Q9P0K1 906 aa20.21■□□□□ 0.83
ECHDC1-214ENST00000474289 GOLGA6L10A0A0M3HER8 536 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 EVI5O60447 810 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 COPB2P35606 906 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 PLTPP55058 493 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 MARSP56192 900 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 DR1Q01658 176 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
ECHDC1-214ENST00000474289 AP1G2O75843 785 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 LUC7L3O95232 432 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 EPS15P42566 896 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 GNAQP50148 359 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 NAPAP54920 295 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 COASYQ13057 564 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 SEPT2Q15019 361 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 CNGA2Q16280 664 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 FBXO25Q8TCJ0 367 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 GLG1Q92896 1179 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 NUDT12Q9BQG2 462 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 POTEMA6NI47 508 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 SNUPNO95149 360 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 CCNG1P51959 295 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 TFAP4Q01664 338 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 GBP7Q8N8V2 638 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 EPS8L3Q8TE67 593 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 FGFR1OP2Q9NVK5 253 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 TTC7AQ9ULT0 858 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 DAAM1Q9Y4D1 1078 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 RPTORQ8N122 1335 aa20.19■□□□□ 0.82
ECHDC1-214ENST00000474289 EIF4E1BA6NMX2 242 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 FLOT1O75955 427 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 GNA14O95837 355 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 SLCO1A2P46721 670 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 C6orf118Q5T5N4 469 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 ZDHHC24Q6UX98 284 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 ADAT2Q7Z6V5 191 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 DGKHQ86XP1 1220 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 NELFCDQ8IXH7 590 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 SYCE1Q8N0S2 351 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 NENFQ9UMX5 172 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 THRAP3Q9Y2W1 955 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 RWDD2BP57060 319 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 KCNH2Q12809 1159 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 RBBP5Q15291 538 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 DCAF12L1Q5VU92 463 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 ASRGL1Q7L266 308 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 UHMK1Q8TAS1 419 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 DNAJC19Q96DA6 116 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 MTMR9Q96QG7 549 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 MOV10L1Q9BXT6 1211 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 CPVLQ9H3G5 476 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 SEMA4AQ9H3S1 761 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 ERVK-5Q9HDB9 667 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 TBC1D7Q9P0N9 293 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 ZFATQ9P243 1243 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 TRIM33Q9UPN9 1127 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 SNX24Q9Y343 169 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 BCL9O00512 1426 aa20.18■□□□□ 0.82
ECHDC1-214ENST00000474289 SMCO2A6NFE2 343 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 UPP2O95045 317 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 UCHL3P15374 230 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 PECAM1P16284 738 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 SLC9A1P19634 815 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 TAF11Q15544 211 aa20.17■□□□□ 0.82
ECHDC1-214ENST00000474289 DPY19L2P1Q6NXN4 242 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms