RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ERVK-5Q9HDB9 667 aa23.06■■□□□ 1.28
APP-215ENST00000474136 TYW1Q9NV66 732 aaKnown RBP23.06■■□□□ 1.28
APP-215ENST00000474136 TMEM260Q9NX78 707 aa23.06■■□□□ 1.28
APP-215ENST00000474136 NOC2LQ9Y3T9 749 aaKnown RBP23.06■■□□□ 1.28
APP-215ENST00000474136 SMIM35A0A1B0GVV1 85 aa23.05■■□□□ 1.28
APP-215ENST00000474136 TECP42680 631 aa23.05■■□□□ 1.28
APP-215ENST00000474136 KCNC3Q14003 757 aa23.05■■□□□ 1.28
APP-215ENST00000474136 PLPP4Q5VZY2 271 aa23.05■■□□□ 1.28
APP-215ENST00000474136 ANKRD54Q6NXT1 300 aa23.05■■□□□ 1.28
APP-215ENST00000474136 LLGL2Q6P1M3 1020 aa23.05■■□□□ 1.28
APP-215ENST00000474136 SYCE2Q6PIF2 218 aa23.05■■□□□ 1.28
APP-215ENST00000474136 ZBTB33Q86T24 672 aa23.05■■□□□ 1.28
APP-215ENST00000474136 ZNF654Q8IZM8 581 aa23.05■■□□□ 1.28
APP-215ENST00000474136 SRBD1Q8N5C6 995 aaKnown RBP23.05■■□□□ 1.28
APP-215ENST00000474136 CTCFLQ8NI51 663 aaPredicted RBP23.05■■□□□ 1.28
APP-215ENST00000474136 ADAM2Q99965 735 aa23.05■■□□□ 1.28
APP-215ENST00000474136 AAASQ9NRG9 546 aa23.05■■□□□ 1.28
APP-215ENST00000474136 SLC9A2Q9UBY0 812 aa23.05■■□□□ 1.28
APP-215ENST00000474136 CDH22Q9UJ99 828 aa23.05■■□□□ 1.28
APP-215ENST00000474136 MYO15AQ9UKN7 3530 aa23.04■■□□□ 1.28
APP-215ENST00000474136 hCG_1642624A0A1W2PR95 340 aa23.04■■□□□ 1.28
APP-215ENST00000474136 MTHFD1LQ6UB35 978 aa23.04■■□□□ 1.28
APP-215ENST00000474136 TMEM40Q8WWA1 233 aa23.04■■□□□ 1.28
APP-215ENST00000474136 MAP4K1Q92918 833 aa23.04■■□□□ 1.28
APP-215ENST00000474136 RIPOR3Q96MK2 946 aa23.04■■□□□ 1.28
APP-215ENST00000474136 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
APP-215ENST00000474136 LY9Q9HBG7 655 aa23.04■■□□□ 1.28
APP-215ENST00000474136 PCDHA6Q9UN73 950 aa23.04■■□□□ 1.28
APP-215ENST00000474136 PCDHA8Q9Y5H6 950 aa23.04■■□□□ 1.28
APP-215ENST00000474136 FGFR1P11362 822 aa23.03■■□□□ 1.28
APP-215ENST00000474136 STAT5BP51692 787 aa23.03■■□□□ 1.28
APP-215ENST00000474136 ACTR2P61160 394 aa23.03■■□□□ 1.28
APP-215ENST00000474136 TMEM184AQ6ZMB5 413 aa23.03■■□□□ 1.28
APP-215ENST00000474136 MB21D2Q8IYB1 491 aaPredicted RBP23.03■■□□□ 1.28
APP-215ENST00000474136 NME8Q8N427 588 aa23.03■■□□□ 1.28
APP-215ENST00000474136 CYP2W1Q8TAV3 490 aa23.03■■□□□ 1.28
APP-215ENST00000474136 MAP3K14Q99558 947 aa23.03■■□□□ 1.28
APP-215ENST00000474136 IRF2BPLQ9H1B7 796 aa23.03■■□□□ 1.28
APP-215ENST00000474136 CWH43Q9H720 699 aa23.03■■□□□ 1.28
APP-215ENST00000474136 RGS18Q9NS28 235 aa23.03■■□□□ 1.28
APP-215ENST00000474136 KCNH7Q9NS40 1196 aa23.03■■□□□ 1.28
APP-215ENST00000474136 LOXHD1Q8IVV2 1947 aa23.02■■□□□ 1.28
APP-215ENST00000474136 DENND3A2RUS2 1198 aa23.02■■□□□ 1.28
APP-215ENST00000474136 SPDYE3A6NKU9 549 aa23.02■■□□□ 1.28
APP-215ENST00000474136 C9IYK1 514 aa23.02■■□□□ 1.28
APP-215ENST00000474136 MAFGO15525 162 aa23.02■■□□□ 1.28
APP-215ENST00000474136 RPS6KA5O75582 802 aa23.02■■□□□ 1.28
APP-215ENST00000474136 DDAH1O94760 285 aa23.02■■□□□ 1.28
APP-215ENST00000474136 RXRAP19793 462 aa23.02■■□□□ 1.28
APP-215ENST00000474136 KLRC1P26715 233 aa23.02■■□□□ 1.28
APP-215ENST00000474136 SMARCA1P28370 1054 aa23.02■■□□□ 1.28
APP-215ENST00000474136 KIF5BP33176 963 aa23.02■■□□□ 1.28
APP-215ENST00000474136 RNF20Q5VTR2 975 aa23.02■■□□□ 1.28
APP-215ENST00000474136 ASCL5Q7RTU5 278 aa23.02■■□□□ 1.28
APP-215ENST00000474136 PLPPR4Q7Z2D5 763 aa23.02■■□□□ 1.28
APP-215ENST00000474136 C22orf23Q9BZE7 217 aa23.02■■□□□ 1.28
APP-215ENST00000474136 ST3GAL5Q9UNP4 418 aa23.02■■□□□ 1.28
APP-215ENST00000474136 HIDE1A8MVS5 230 aa23.01■■□□□ 1.27
APP-215ENST00000474136 PDE12Q6L8Q7 609 aaKnown RBP23.01■■□□□ 1.27
APP-215ENST00000474136 SLC24A5Q71RS6 500 aa23.01■■□□□ 1.27
APP-215ENST00000474136 KREMEN2Q8NCW0 462 aa23.01■■□□□ 1.27
APP-215ENST00000474136 TNPO1Q92973 898 aaKnown RBP23.01■■□□□ 1.27
APP-215ENST00000474136 PPP1R16BQ96T49 567 aa23.01■■□□□ 1.27
APP-215ENST00000474136 MXRA8Q9BRK3 442 aa23.01■■□□□ 1.27
APP-215ENST00000474136 TSHZ2Q9NRE2 1034 aa23.01■■□□□ 1.27
APP-215ENST00000474136 FSD2A1L4K1 749 aa23■■□□□ 1.27
APP-215ENST00000474136 GALR2O43603 387 aaPredicted RBP23■■□□□ 1.27
APP-215ENST00000474136 SRGAP2BP0DMP2 458 aa23■■□□□ 1.27
APP-215ENST00000474136 ARP10275 920 aa23■■□□□ 1.27
APP-215ENST00000474136 RBM25P49756 843 aaKnown RBP23■■□□□ 1.27
APP-215ENST00000474136 RAB11FIP4Q86YS3 637 aa23■■□□□ 1.27
APP-215ENST00000474136 KIAA0319LQ8IZA0 1049 aa23■■□□□ 1.27
APP-215ENST00000474136 MRPS27Q92552 414 aaKnown RBP23■■□□□ 1.27
APP-215ENST00000474136 TCF25Q9BQ70 676 aa23■■□□□ 1.27
APP-215ENST00000474136 LZTS2Q9BRK4 669 aa23■■□□□ 1.27
APP-215ENST00000474136 SMOC2Q9H3U7 446 aa23■■□□□ 1.27
APP-215ENST00000474136 C1orf112Q9NSG2 853 aa23■■□□□ 1.27
APP-215ENST00000474136 PLXNA3P51805 1871 aa22.99■■□□□ 1.27
APP-215ENST00000474136 FNDC1Q4ZHG4 1894 aaPredicted RBP22.99■■□□□ 1.27
APP-215ENST00000474136 ITGB3BPQ13352 177 aaPredicted RBP22.99■■□□□ 1.27
APP-215ENST00000474136 RASGRP4Q8TDF6 673 aa22.99■■□□□ 1.27
APP-215ENST00000474136 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
APP-215ENST00000474136 SDF4Q9BRK5 362 aa22.99■■□□□ 1.27
APP-215ENST00000474136 ATP6V0A4Q9HBG4 840 aa22.99■■□□□ 1.27
APP-215ENST00000474136 ENTPD7Q9NQZ7 604 aa22.99■■□□□ 1.27
APP-215ENST00000474136 SPTBN4Q9H254 2564 aa22.98■■□□□ 1.27
APP-215ENST00000474136 NFASCO94856 1347 aa22.98■■□□□ 1.27
APP-215ENST00000474136 PROB1E7EW31 1015 aa22.98■■□□□ 1.27
APP-215ENST00000474136 BRD1O95696 1058 aa22.98■■□□□ 1.27
APP-215ENST00000474136 LAG3P18627 525 aa22.98■■□□□ 1.27
APP-215ENST00000474136 PBX3P40426 434 aa22.98■■□□□ 1.27
APP-215ENST00000474136 GNAQP50148 359 aa22.98■■□□□ 1.27
APP-215ENST00000474136 ANAPC15P60006 121 aa22.98■■□□□ 1.27
APP-215ENST00000474136 COL9A3Q14050 684 aaPredicted RBP22.98■■□□□ 1.27
APP-215ENST00000474136 LRRC55Q6ZSA7 311 aa22.98■■□□□ 1.27
APP-215ENST00000474136 CCDC82Q8N4S0 544 aa22.98■■□□□ 1.27
APP-215ENST00000474136 TMEM105Q8N8V8 129 aa22.98■■□□□ 1.27
APP-215ENST00000474136 PGBD1Q96JS3 809 aa22.98■■□□□ 1.27
APP-215ENST00000474136 LZTS1Q9Y250 596 aa22.98■■□□□ 1.27
APP-215ENST00000474136 RIF1Q5UIP0 2472 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms