RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RIC8BQ9NVN3 520 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 ACSL6Q9UKU0 697 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 ST20-MTHFSA0A0A6YYL1 179 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 TCRBV5S4A2TA0A5A2 114 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 PRAMEF25A6NGN4 478 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 KCNK3O14649 394 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 FOXP2O15409 715 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-212ENST00000473961 ZBTB7AO95365 584 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 HSPA6P17066 643 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 PTPN1P18031 435 aaKnown RBP5.46□□□□□ -1.54
BRCA1-212ENST00000473961 TACR1P25103 407 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 RHBDL3P58872 404 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 HERVK_113P62684 666 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 TCIRG1Q13488 830 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 SNX17Q15036 470 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 PCBP2Q15366 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
BRCA1-212ENST00000473961 NR0B2Q15466 257 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 KCNA10Q16322 511 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 FYB2Q5VWT5 728 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 EXOC8Q8IYI6 725 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 MIER2Q8N344 545 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 SAMD3Q8N6K7 520 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 FERMT2Q96AC1 680 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 TTC17Q96AE7 1141 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 CD244Q9BZW8 370 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 ZNF700Q9H0M5 742 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 ADAMTS10Q9H324 1103 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 TMPRSS5Q9H3S3 457 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 ARNT2Q9HBZ2 717 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 DNAJC28Q9NX36 388 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 MSRAQ9UJ68 235 aa5.46□□□□□ -1.54
BRCA1-212ENST00000473961 UBA6A0AVT1 1052 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 VSTM5A8MXK1 200 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 SLC27A2O14975 620 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 ENPP1P22413 925 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 AKAP5P24588 427 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 SLC5A3P53794 718 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 PURAQ00577 322 aaKnown RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 TUSC3Q13454 348 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 FSCN1Q16658 493 aaKnown RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 MAP9Q49MG5 647 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 KSR2Q6VAB6 950 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 CMTR2Q8IYT2 770 aaKnown RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 TTLL11Q8NHH1 800 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 SH3RF2Q8TEC5 729 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 RAX2Q96IS3 184 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 RPS6KC1Q96S38 1066 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 PDGFDQ9GZP0 370 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 CCM2LQ9NUG4 571 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 OBP2AQ9NY56 170 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 ASH2LQ9UBL3 628 aa5.45□□□□□ -1.54
BRCA1-212ENST00000473961 DBR1Q9UK59 544 aaKnown RBP5.45□□□□□ -1.54
BRCA1-212ENST00000473961 FZD9O00144 591 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 DVL2O14641 736 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 SRGAP3O43295 1099 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 PPP1R11O60927 126 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 DTNBO60941 627 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 TADA3O75528 432 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 NBPF7P0C2Y1 421 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 GLI4P10075 376 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 PTX3P26022 381 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 GPR3P46089 330 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 CEBPAP49715 358 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 HK2P52789 917 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 MVKQ03426 396 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 TMEM62Q0P6H9 643 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 SLC9A5Q14940 896 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 UGT8Q16880 541 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 LONRF3Q496Y0 759 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 ARHGAP29Q52LW3 1261 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 RALGPS1Q5JS13 557 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 CIAPIN1Q6FI81 312 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 MILR1Q7Z6M3 343 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 CERS3Q8IU89 383 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 TPH2Q8IWU9 490 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 FBXO15Q8NCQ5 510 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 HIPK4Q8NE63 616 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
BRCA1-212ENST00000473961 PMM1Q92871 262 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 ORAI2Q96SN7 254 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 PARD6AQ9NPB6 346 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 CTNND2Q9UQB3 1225 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 ASB1Q9Y576 335 aa5.44□□□□□ -1.54
BRCA1-212ENST00000473961 OFD1O75665 1012 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 CYBBP04839 570 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 GLI1P08151 1106 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 PNLIPP16233 465 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 SYN1P17600 705 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 SLC16A1P53985 500 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 MRPS9P82933 396 aaKnown RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 PICALMQ13492 652 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 NR1I3Q14994 352 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 TTC38Q5R3I4 469 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms