RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 KRT76Q01546 638 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 STXBP2Q15833 593 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 MAN2A1Q16706 1144 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 PNMA8AQ86V59 439 aaPredicted RBP6.87□□□□□ -1.31
CLK1-210ENST00000473565 CNGA4Q8IV77 575 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 PANX2Q96RD6 677 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 IRX2Q9BZI1 471 aaPredicted RBP6.87□□□□□ -1.31
CLK1-210ENST00000473565 EFCC1Q9HA90 598 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 PCDHB13Q9Y5F0 798 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 PCDHA10Q9Y5I2 948 aa6.87□□□□□ -1.31
CLK1-210ENST00000473565 SPATA31C2B4DYI2 1134 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 K7ENM7 598 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 RIOK3O14730 519 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 FANCGO15287 622 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 AKAP3O75969 853 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 NR3C1P04150 777 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TPM2P07951 284 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TPM1P09493 284 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 CYP2J2P51589 502 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 PSMC5P62195 406 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FKBP15Q5T1M5 1219 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FAM102BQ5T8I3 360 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 ZNF720Q7Z2F6 126 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SAMD3Q8N6K7 520 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 NEK9Q8TD19 979 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FGD4Q96M96 766 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 NMRK2Q9NPI5 230 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 OLFML3Q9NRN5 406 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SLC9A2Q9UBY0 812 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 LUC7L2Q9Y383 392 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 MYH9P35579 1960 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 ZNFX1Q9P2E3 1918 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 UQCRHLA0A096LP55 91 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 A0A1W2PQC6 194 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 CETN3O15182 167 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 CELF2O95319 508 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 UQCRHP07919 91 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 PLEKP08567 350 aaPredicted RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 GAP43P17677 238 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 JAK3P52333 1124 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 ZNF131P52739 623 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 PEX3P56589 373 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 KCNMA1Q12791 1236 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 LY6KQ17RY6 165 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 DCAF17Q5H9S7 520 aaPredicted RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 WDR59Q6PJI9 974 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FAM133AQ8N9E0 248 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 RDH13Q8NBN7 331 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 NLRC4Q9NPP4 1024 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 LZTFL1Q9NQ48 299 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SEPT9Q9UHD8 586 aaPredicted RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SLC16A4O15374 487 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 EIF3JO75822 258 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 ARIH2O95376 493 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FGFR1OPO95684 399 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 UBA1P22314 1058 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 PRKCEQ02156 737 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 SNAPC2Q13487 334 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TCERG1LQ5VWI1 586 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 ZNF746Q6NUN9 644 aaPredicted RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 XRRA1Q6P2D8 792 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 FBXO16Q8IX29 292 aaPredicted RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 ANKRD13CQ8N6S4 541 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 CEP170P1Q96L14 293 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 ERGIC2Q96RQ1 377 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 PCIF1Q9H4Z3 704 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 TYW1Q9NV66 732 aaKnown RBP6.86□□□□□ -1.31
CLK1-210ENST00000473565 CAPN11Q9UMQ6 739 aa6.86□□□□□ -1.31
CLK1-210ENST00000473565 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLK1-210ENST00000473565 PFASO15067 1338 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 CCL15-CCL14A0A0B4J2E2 113 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 PDXKO00764 312 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 STBD1O95210 358 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 ACTN1P12814 892 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 SFNP31947 248 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 CCL15Q16663 113 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 BMT2Q1RMZ1 405 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 MTERF2Q49AM1 385 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 FASTKD5Q7L8L6 764 aaKnown RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 C4orf19Q8IY42 314 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 SYCP3Q8IZU3 236 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 COPS5Q92905 334 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 MMP19Q99542 508 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 FBXO40Q9UH90 709 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
CLK1-210ENST00000473565 TRAF3IP3Q9Y228 551 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 LOXHD1Q8IVV2 1947 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 CCDC169A6NNP5 214 aa6.85□□□□□ -1.31
CLK1-210ENST00000473565 BTBD19C9JJ37 291 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms