RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 VTNP04004 478 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 IBSPP21815 317 aaPredicted RBP18.88■□□□□ 0.61
USP40-212ENST00000473191 GPM6BQ13491 265 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 MCTP2Q6DN12 878 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 TRIM22Q8IYM9 498 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 BLIDQ8IZY5 108 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 HLA-CQ95604 372 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 LMCD1Q9NZU5 365 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 SAMM50Q9Y512 469 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 PCDHA10Q9Y5I2 948 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 RALGAPA2Q2PPJ7 1873 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 TMEM150BA6NC51 233 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 M0QZ92 97 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 CSPG5O95196 566 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 LARGE1O95461 756 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 PSAPP07602 524 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 COL1A2P08123 1366 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 MYH9P35579 1960 aaKnown RBP18.87■□□□□ 0.61
USP40-212ENST00000473191 USP11P51784 963 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 NFX1Q12986 1120 aaKnown RBP18.87■□□□□ 0.61
USP40-212ENST00000473191 PAK2Q13177 524 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 KIZQ2M2Z5 673 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 ZNF484Q5JVG2 852 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
USP40-212ENST00000473191 FIBCD1Q8N539 461 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 BBXQ8WY36 941 aaPredicted RBP18.87■□□□□ 0.61
USP40-212ENST00000473191 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 ZNF668Q96K58 619 aaPredicted RBP18.87■□□□□ 0.61
USP40-212ENST00000473191 OSMRQ99650 979 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 KIAA1671Q9BY89 1806 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 ERVK-5Q9HDB9 667 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 DISC1Q9NRI5 854 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 SQORQ9Y6N5 450 aa18.87■□□□□ 0.61
USP40-212ENST00000473191 GPR32O75388 356 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 SEC24BO95487 1268 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 CTNNB1P35222 781 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 CLCN3P51790 818 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 AK2P54819 239 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 PAN2Q504Q3 1202 aaKnown RBP18.86■□□□□ 0.61
USP40-212ENST00000473191 NME8Q8N427 588 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 LRRC71Q8N4P6 559 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 METTL13Q8N6R0 699 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 OXER1Q8TDS5 423 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 TNPO1Q92973 898 aaKnown RBP18.86■□□□□ 0.61
USP40-212ENST00000473191 MRPL38Q96DV4 380 aaKnown RBP18.86■□□□□ 0.61
USP40-212ENST00000473191 SH2D3AQ9BRG2 576 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 COG5Q9UP83 839 aa18.86■□□□□ 0.61
USP40-212ENST00000473191 GRM6O15303 877 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 SLC37A4O43826 429 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 PSMD10O75832 226 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 BTG3Q14201 252 aaPredicted RBP18.85■□□□□ 0.61
USP40-212ENST00000473191 INF2Q27J81 1249 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 Q4G0T1 1027 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 EARS2Q5JPH6 523 aaKnown RBP18.85■□□□□ 0.61
USP40-212ENST00000473191 LRCH2Q5VUJ6 765 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 FAM228AQ86W67 206 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 LINC01465Q8N7H1 131 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 PHF20Q9BVI0 1012 aa18.85■□□□□ 0.61
USP40-212ENST00000473191 SLKQ9H2G2 1235 aaPredicted RBP18.85■□□□□ 0.61
USP40-212ENST00000473191 MRPL42Q9Y6G3 142 aaKnown RBP18.85■□□□□ 0.61
USP40-212ENST00000473191 CYP3A7-CYP3A51PA0A087WV96 503 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.84■□□□□ 0.61
USP40-212ENST00000473191 WDR64B1ANS9 1081 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 PFKFB2O60825 505 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 GAS7O60861 476 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 STBD1O95210 358 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
USP40-212ENST00000473191 CYP3A7P24462 503 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 BMPR1AP36894 532 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 PRKCEQ02156 737 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 TCEAL5Q5H9L2 206 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 B3GNT9Q6UX72 402 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 IL27Q8NEV9 243 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 ETNPPLQ8TBG4 499 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 CLP1Q92989 425 aaKnown RBP18.84■□□□□ 0.61
USP40-212ENST00000473191 MBOAT7Q96N66 472 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 SAMD11Q96NU1 681 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 RIT2Q99578 217 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 TEKT3Q9BXF9 490 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 UBE2ZQ9H832 354 aaPredicted RBP18.84■□□□□ 0.61
USP40-212ENST00000473191 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 ST3GAL5Q9UNP4 418 aa18.84■□□□□ 0.61
USP40-212ENST00000473191 FAM205CA6NFA0 338 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 C5orf67F2Z3F1 127 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 RPS6KA5O75582 802 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 OATP04181 439 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 FDPSP14324 419 aaKnown RBP18.83■□□□□ 0.6
USP40-212ENST00000473191 DRP2Q13474 957 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 ME3Q16798 604 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 EFCAB12Q6NXP0 572 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.83■□□□□ 0.6
USP40-212ENST00000473191 FTHL17Q9BXU8 183 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 ALG13Q9NP73 1137 aaKnown RBP18.83■□□□□ 0.6
USP40-212ENST00000473191 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.6
USP40-212ENST00000473191 KCNA5P22460 613 aa18.82■□□□□ 0.6
USP40-212ENST00000473191 DNAJB1P25685 340 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms