RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 RFC2P35250 354 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 NASPP49321 788 aaPredicted RBP23.25■■□□□ 1.31
TOP3A-204ENST00000472959 CCL23P55773 120 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 PPIGQ13427 754 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■■■■□ 25.5
TOP3A-204ENST00000472959 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 KRT79Q5XKE5 535 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 LRRC8DQ7L1W4 858 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 EXOC8Q8IYI6 725 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 NME8Q8N427 588 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 CYP26B1Q9NR63 512 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 ANKEF1Q9NU02 776 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 CEP290O15078 2479 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 MED24O75448 989 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 BMP8BP34820 402 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 CCT6AP40227 531 aaKnown RBP23.24■■□□□ 1.31
TOP3A-204ENST00000472959 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
TOP3A-204ENST00000472959 TBC1D8BQ0IIM8 1120 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 ZNF618Q5T7W0 954 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 DNAJB3Q8WWF6 145 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 NACC1Q96RE7 527 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 JPH2Q9BR39 696 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-204ENST00000472959 PCDH10Q9P2E7 1040 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
TOP3A-204ENST00000472959 TMEM150BA6NC51 233 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 RSPH10B2B2RC85 870 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 RSPH10BP0C881 870 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 CSF2RAP15509 400 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 TMOD1P28289 359 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 LONP1P36776 959 aaKnown RBP23.23■■□□□ 1.31
TOP3A-204ENST00000472959 FAM26DQ5JW98 314 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 RPUSD2Q8IZ73 545 aaKnown RBP23.23■■□□□ 1.31
TOP3A-204ENST00000472959 METTL13Q8N6R0 699 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 SNX29Q8TEQ0 813 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 ZBTB10Q96DT7 871 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 CEP89Q96ST8 783 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 FAM49AQ9H0Q0 323 aaPredicted RBP23.23■■□□□ 1.31
TOP3A-204ENST00000472959 ATP6V1DQ9Y5K8 247 aa23.23■■□□□ 1.31
TOP3A-204ENST00000472959 MYH9P35579 1960 aaKnown RBP23.22■■□□□ 1.31
TOP3A-204ENST00000472959 SLC26A4O43511 780 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 NUCB2P80303 420 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 XKR9Q5GH70 373 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 IER5Q5VY09 327 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 PLA2G4FQ68DD2 849 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 TRAF7Q6Q0C0 670 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 KIAA0319LQ8IZA0 1049 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 KCTD17Q8N5Z5 321 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 SCLYQ96I15 445 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
TOP3A-204ENST00000472959 IL23AQ9NPF7 189 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 TFIP11Q9UBB9 837 aaKnown RBP23.22■■□□□ 1.31
TOP3A-204ENST00000472959 CFAP45Q9UL16 551 aa23.22■■□□□ 1.31
TOP3A-204ENST00000472959 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
TOP3A-204ENST00000472959 PP2D1A8MPX8 630 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 MAFO75444 373 aaPredicted RBP23.21■■□□□ 1.31
TOP3A-204ENST00000472959 YEATS4O95619 227 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 PFKMP08237 780 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 MARCKSP29966 332 aaPredicted RBP23.21■■□□□ 1.31
TOP3A-204ENST00000472959 DDIT3P35638 169 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 RFC5P40937 340 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 NPEPPSP55786 919 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 STK38Q15208 465 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 EFCAB12Q6NXP0 572 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 ZNF710Q8N1W2 664 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 LINC00301Q8NCQ3 95 aa23.21■■□□□ 1.31
TOP3A-204ENST00000472959 FBXO2Q9UK22 296 aaPredicted RBP23.21■■□□□ 1.31
TOP3A-204ENST00000472959 DBR1Q9UK59 544 aaKnown RBP23.21■■□□□ 1.31
TOP3A-204ENST00000472959 KAT6AQ92794 2004 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 IGKV6-21A0A0C4DH24 114 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 ZBTB39O15060 712 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 MRPS6P82932 125 aaKnown RBP23.2■■□□□ 1.3
TOP3A-204ENST00000472959 POTEGQ6S5H5 508 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 CHRDL2Q6WN34 429 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 LINC01465Q8N7H1 131 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 PIGOQ8TEQ8 1089 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 SLC7A3Q8WY07 619 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 CCDC43Q96MW1 224 aaKnown RBP23.2■■□□□ 1.3
TOP3A-204ENST00000472959 MAP7D2Q96T17 732 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 SH2D3AQ9BRG2 576 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 MMTAG2Q9BU76 263 aaKnown RBP23.2■■□□□ 1.3
TOP3A-204ENST00000472959 PRO3102Q9H379 93 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 SUGCTQ9HAC7 445 aa23.2■■□□□ 1.3
TOP3A-204ENST00000472959 KDM3AQ9Y4C1 1321 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 M0QZ92 97 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 PPP6R2O75170 966 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 CTSHP09668 335 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 CDC25AP30304 524 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 UBA7P41226 1012 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 RARRES1P49788 294 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 DNM2P50570 870 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 FOXD4L6Q3SYB3 417 aaPredicted RBP23.19■■□□□ 1.3
TOP3A-204ENST00000472959 FOXD4L3Q6VB84 417 aaPredicted RBP23.19■■□□□ 1.3
TOP3A-204ENST00000472959 KRI1Q8N9T8 703 aaKnown RBP23.19■■□□□ 1.3
TOP3A-204ENST00000472959 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
TOP3A-204ENST00000472959 DHX33Q9H6R0 707 aaKnown RBP23.19■■□□□ 1.3
TOP3A-204ENST00000472959 KIAA1024Q9UPX6 916 aa23.19■■□□□ 1.3
TOP3A-204ENST00000472959 TRIP12Q14669 1992 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-204ENST00000472959 LTBP2Q14767 1821 aa23.18■■□□□ 1.3
TOP3A-204ENST00000472959 SPTLC2O15270 562 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms