RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 LRRC41Q15345 812 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 UGCGQ16739 394 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ARMCX2Q7L311 632 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 CCDC186Q7Z3E2 898 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 FILIP1Q7Z7B0 1213 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 VSTM4Q8IW00 320 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-206ENST00000472815 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
HIF3A-206ENST00000472815 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 SEPT1Q8WYJ6 367 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-206ENST00000472815 DUSP9Q99956 384 aaKnown RBP16.15■□□□□ 0.18
HIF3A-206ENST00000472815 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 KCNG1Q9UIX4 513 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ZKSCAN5Q9Y2L8 839 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 THSD7BQ9C0I4 1608 aa16.15■□□□□ 0.18
HIF3A-206ENST00000472815 ESPNB1AK53 854 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 CALUO43852 315 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 HIP1RO75146 1068 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 NR1I3Q14994 352 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 KNOP1Q1ED39 458 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 BMT2Q1RMZ1 405 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 EDRF1Q3B7T1 1238 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 CCDC60Q8IWA6 550 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 SCFD1Q8WVM8 642 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 R3HDMLQ9H3Y0 253 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 RSPH10B2B2RC85 870 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 COBLO75128 1261 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 DGAT1O75907 488 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 RSPH10BP0C881 870 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 PRKCEQ02156 737 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 EPM2AIP1Q7L775 607 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 FAM167AQ96KS9 214 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 C17orf75Q9HAS0 396 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 PPME1Q9Y570 386 aa16.14■□□□□ 0.17
HIF3A-206ENST00000472815 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-206ENST00000472815 PDXKO00764 312 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 TLR2O60603 784 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 TPM1P09493 284 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 RPL13P26373 211 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 ABCD1P33897 745 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 MAP2K2P36507 400 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 MTIF2P46199 727 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 VEGFBP49765 207 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 CELF3Q5SZQ8 465 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 UTP14CQ5TAP6 766 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 MAMDC4Q6UXC1 1216 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 ANO5Q75V66 913 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 ZNF507Q8TCN5 953 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 KIFAP3Q92845 792 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
HIF3A-206ENST00000472815 NRBP2Q9NSY0 501 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
HIF3A-206ENST00000472815 ADGRA2Q96PE1 1338 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 IGKV6D-21A0A0A0MT36 114 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 OATP04181 439 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 PLS3P13797 630 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 PTGS1P23219 599 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
HIF3A-206ENST00000472815 TM4SF4P48230 202 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 SMTNP53814 917 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 LY6KQ17RY6 165 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 NELFCDQ8IXH7 590 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 EXOC8Q8IYI6 725 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 AFAP1L1Q8TED9 768 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 KCTD10Q9H3F6 313 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 TYW1Q9NV66 732 aaKnown RBP16.12■□□□□ 0.17
HIF3A-206ENST00000472815 TRAF3IP3Q9Y228 551 aa16.12■□□□□ 0.17
HIF3A-206ENST00000472815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
HIF3A-206ENST00000472815 PES1O00541 588 aaKnown RBP16.11■□□□□ 0.17
HIF3A-206ENST00000472815 CETN3O15182 167 aa16.11■□□□□ 0.17
HIF3A-206ENST00000472815 ZNF862O60290 1169 aa16.11■□□□□ 0.17
HIF3A-206ENST00000472815 SORBS3O60504 671 aa16.11■□□□□ 0.17
HIF3A-206ENST00000472815 AOC2O75106 756 aa16.11■□□□□ 0.17
HIF3A-206ENST00000472815 PRKCSHP14314 528 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-206ENST00000472815 SLC26A2P50443 739 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms