RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CMTR2Q8IYT2 770 aaKnown RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 SRBD1Q8N5C6 995 aaKnown RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 CYP2W1Q8TAV3 490 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 MFSD1Q9H3U5 465 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 NR2E1Q9Y466 385 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 HIP1O00291 1037 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 STAG3L1P0CL83 205 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 SP100P23497 879 aaPredicted RBP10.71□□□□□ -0.69
VCL-204ENST00000472585 ERVFC1P60507 584 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 MTMR3Q13615 1198 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 WTAPQ15007 396 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 UBE2SQ16763 222 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 TMEM266Q2M3C6 531 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 SPOUT1Q5T280 376 aaKnown RBP10.71□□□□□ -0.69
VCL-204ENST00000472585 XRRA1Q6P2D8 792 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 SMARCC2Q8TAQ2 1214 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 ATP8B4Q8TF62 1192 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 SUSD6Q92537 303 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 GPRASP2Q96D09 838 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 CDCA3Q99618 268 aaPredicted RBP10.71□□□□□ -0.69
VCL-204ENST00000472585 SPZ1Q9BXG8 430 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 RWDD1Q9H446 243 aaPredicted RBP10.71□□□□□ -0.69
VCL-204ENST00000472585 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 TSHZ2Q9NRE2 1034 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 ERAP1Q9NZ08 941 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
VCL-204ENST00000472585 RXRAP19793 462 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 CHMLP26374 656 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 TRAF1Q13077 416 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 KCNC3Q14003 757 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 DGLUCYQ7Z3D6 616 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 NLRX1Q86UT6 975 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 NPAS4Q8IUM7 802 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 TMEM105Q8N8V8 129 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 TMEM40Q8WWA1 233 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 GLG1Q92896 1179 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 S1PR5Q9H228 398 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 SMARCAD1Q9H4L7 1026 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 JADE2Q9NQC1 790 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 CDH22Q9UJ99 828 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 SORCS3Q9UPU3 1222 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 PCDHB12Q9Y5F1 795 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 TPRP12270 2363 aaKnown RBP10.7□□□□□ -0.7
VCL-204ENST00000472585 LOXHD1Q8IVV2 1947 aa10.7□□□□□ -0.7
VCL-204ENST00000472585 IGSF9BQ9UPX0 1349 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 ARP10275 920 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 SCG2P13521 617 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 TECP42680 631 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 UBE3AQ05086 875 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 TRDNQ13061 729 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 CATIPQ7Z7H3 387 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
VCL-204ENST00000472585 NCOA7Q8NI08 942 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 RRP36Q96EU6 259 aaKnown RBP10.69□□□□□ -0.7
VCL-204ENST00000472585 APOL5Q9BWW9 433 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 FTHL17Q9BXU8 183 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 CELF4Q9BZC1 486 aaKnown RBP10.69□□□□□ -0.7
VCL-204ENST00000472585 PSTPIP2Q9H939 334 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 LRFN2Q9ULH4 789 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 PCDHA6Q9UN73 950 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 NOC2LQ9Y3T9 749 aaKnown RBP10.69□□□□□ -0.7
VCL-204ENST00000472585 PCDHA8Q9Y5H6 950 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 PCDHA2Q9Y5H9 948 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 TRPV2Q9Y5S1 764 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 DMXL1Q9Y485 3027 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 CACNA1GO43497 2377 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 DMDP11532 3685 aa10.69□□□□□ -0.7
VCL-204ENST00000472585 MED19A0JLT2 244 aaPredicted RBP10.68□□□□□ -0.7
VCL-204ENST00000472585 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 FSCN2O14926 492 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 ATG7O95352 703 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 CCNE2O96020 404 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 IBSPP21815 317 aaPredicted RBP10.68□□□□□ -0.7
VCL-204ENST00000472585 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 CLCN5P51795 746 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 APOBRQ0VD83 1088 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 ITGB3BPQ13352 177 aaPredicted RBP10.68□□□□□ -0.7
VCL-204ENST00000472585 MTMR1Q13613 665 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 DUSP6Q16828 381 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
VCL-204ENST00000472585 ANKRD54Q6NXT1 300 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 SYCE2Q6PIF2 218 aa10.68□□□□□ -0.7
VCL-204ENST00000472585 MTHFD1LQ6UB35 978 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms