RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 DDX1Q92499 740 aaKnown RBP11.88□□□□□ -0.51
CDHR3-209ENST00000472116 GPATCH3Q96I76 525 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
CDHR3-209ENST00000472116 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
CDHR3-209ENST00000472116 PCDHGA2Q9Y5H1 932 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 KRBA1A5PL33 1030 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
CDHR3-209ENST00000472116 ORC4O43929 436 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
CDHR3-209ENST00000472116 GOLGA8HP0CJ92 632 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 SP4Q02446 784 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 GRIK4Q16099 956 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 TMC5Q6UXY8 1006 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 CABP7Q86V35 215 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 ABI1Q8IZP0 508 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
CDHR3-209ENST00000472116 GLG1Q92896 1179 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 TTC14Q96N46 770 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
CDHR3-209ENST00000472116 SPG21Q9NZD8 308 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 RAB23Q9ULC3 237 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 PCDHA1Q9Y5I3 950 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 EVPLQ92817 2033 aa11.87□□□□□ -0.51
CDHR3-209ENST00000472116 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SOBPA7XYQ1 873 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SLC30A4O14863 429 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 HOXA2O43364 376 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SRFP11831 508 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 PDE4AP27815 886 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 HSD17B4P51659 736 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 IGBP1P78318 339 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 FAM102BQ5T8I3 360 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 KCNT2Q6UVM3 1135 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SHDQ96IW2 340 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 SFXN1Q9H9B4 322 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 ECHDC1Q9NTX5 307 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 DOCK8Q8NF50 2099 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
CDHR3-209ENST00000472116 TBC1D4O60343 1298 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 STAM2O75886 525 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-209ENST00000472116 TMEM62Q0P6H9 643 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 GIT2Q14161 759 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 STOX1Q6ZVD7 989 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 SLC24A5Q71RS6 500 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 PPFIBP1Q86W92 1011 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 STAMQ92783 540 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 GPKOWQ92917 476 aaPredicted RBP eCLIP11.85□□□□□ -0.51
CDHR3-209ENST00000472116 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 CWH43Q9H720 699 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
CDHR3-209ENST00000472116 MYH15Q9Y2K3 1946 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 MBLAC1A4D2B0 266 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 RRN3P2A6NIE6 340 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 FIBPO43427 364 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 CXCL14O95715 111 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 PROS1P07225 676 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 MARK3P27448 753 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 DCLRE1AQ6PJP8 1040 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 GPR149Q86SP6 731 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 PJA1Q8NG27 643 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 GPR152Q8TDT2 470 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 NXPE3Q969Y0 559 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 ADAM2Q99965 735 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 AMNQ9BXJ7 453 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 CELF4Q9BZC1 486 aaKnown RBP11.84□□□□□ -0.51
CDHR3-209ENST00000472116 LRRCC1Q9C099 1032 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 EPC1Q9H2F5 836 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 ZSCAN32Q9NX65 697 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 DLGAP2Q9P1A6 1054 aa11.84□□□□□ -0.51
CDHR3-209ENST00000472116 ZFYVE26Q68DK2 2539 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms