RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 EVPLQ92817 2033 aa16.38■□□□□ 0.21
SMARCD3-207ENST00000472103 A0A1B0GVL5 298 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 C17orf102A2RUQ5 167 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 DKC1O60832 514 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 MUTP22033 750 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 RARRES1P49788 294 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 RUFY4Q6ZNE9 571 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 PDILTQ8N807 584 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 FAM167AQ96KS9 214 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 STK24Q9Y6E0 443 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 KDM3AQ9Y4C1 1321 aa16.37■□□□□ 0.21
SMARCD3-207ENST00000472103 PQBP1O60828 265 aaKnown RBP16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 C22orf31O95567 290 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 CD4P01730 458 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 PFKFB1P16118 471 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 CMA1P23946 247 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 TLE2Q04725 743 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 ZNF484Q5JVG2 852 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 C1orf53Q5VUE5 145 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 MTHFD1LQ6UB35 978 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 CEP170P1Q96L14 293 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 CYP26B1Q9NR63 512 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 ANKEF1Q9NU02 776 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 HPSEQ9Y251 543 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 COL1A2P08123 1366 aa16.36■□□□□ 0.21
SMARCD3-207ENST00000472103 A0A1W2PQ27 194 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 A0A1W2PQ64 194 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 A0A1W2PQD8 194 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 MBLAC1A4D2B0 266 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 EYA4O95677 639 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 CYP2C9P11712 490 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 KLRC1P26715 233 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 MCM6Q14566 821 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 E2F4Q16254 413 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 PTGISQ16647 500 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 BHMT2Q9H2M3 363 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 XPNPEP1Q9NQW7 623 aa16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 DBR1Q9UK59 544 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-207ENST00000472103 FAM237AA0A1B0GTK4 181 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 SLC26A4O43511 780 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 CAPN15O75808 1086 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 NDUFA8P51970 172 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 FAAP100Q0VG06 881 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 DRP2Q13474 957 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 OTUD6AQ7L8S5 288 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 SH3RF1Q7Z6J0 888 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 LRRC71Q8N4P6 559 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 LINC01465Q8N7H1 131 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 RASSF8Q8NHQ8 419 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 RAD54LQ92698 747 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 DHX58Q96C10 678 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 POLD4Q9HCU8 107 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 PDLIM7Q9NR12 457 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 TUBE1Q9UJT0 475 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 DNM3Q9UQ16 869 aa16.34■□□□□ 0.21
SMARCD3-207ENST00000472103 LOXHD1Q8IVV2 1947 aa16.33■□□□□ 0.21
SMARCD3-207ENST00000472103 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 USO1O60763 962 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 PLA2G4BP0C869 781 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 TXLNAP40222 546 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 CLCN3P51790 818 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 SLC12A3P55017 1021 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 TRIM71Q2Q1W2 868 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 RUSC1Q9BVN2 902 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 KCNH3Q9ULD8 1083 aa16.33■□□□□ 0.2
SMARCD3-207ENST00000472103 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 ARHGEF35A5YM69 484 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 MAFO75444 373 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 LIG1P18858 919 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
SMARCD3-207ENST00000472103 EFCAB12Q6NXP0 572 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms