RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 TUBE1Q9UJT0 475 aa21.13■□□□□ 0.97
SNX4-203ENST00000471751 ODF2LQ9ULJ1 636 aa21.13■□□□□ 0.97
SNX4-203ENST00000471751 ARHGEF35A5YM69 484 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 F2P00734 622 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 MYCP01106 439 aaPredicted RBP21.12■□□□□ 0.97
SNX4-203ENST00000471751 RFC5P40937 340 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 SARSP49591 514 aaKnown RBP21.12■□□□□ 0.97
SNX4-203ENST00000471751 DPYDQ12882 1025 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 KCNB1Q14721 858 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 TARBP2Q15633 366 aaKnown RBP21.12■□□□□ 0.97
SNX4-203ENST00000471751 RINT1Q6NUQ1 792 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 C1orf186Q6ZWK4 172 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 CKAP2LQ8IYA6 745 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 PIGOQ8TEQ8 1089 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 ARMC5Q96C12 935 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 MTRQ99707 1265 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 C17orf75Q9HAS0 396 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 PAK6Q9NQU5 681 aaPredicted RBP21.12■□□□□ 0.97
SNX4-203ENST00000471751 CYP26B1Q9NR63 512 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 RMND1Q9NWS8 449 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 SYNRGQ9UMZ2 1314 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 KAT6AQ92794 2004 aa21.12■□□□□ 0.97
SNX4-203ENST00000471751 RRN3P2A6NIE6 340 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 HAS3O00219 553 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 C6orf222P0C671 652 aaPredicted RBP21.11■□□□□ 0.97
SNX4-203ENST00000471751 CYP11B2P19099 503 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 PLCB4Q15147 1175 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 GNASQ5JWF2 1037 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 UTP14CQ5TAP6 766 aaKnown RBP21.11■□□□□ 0.97
SNX4-203ENST00000471751 LHX8Q68G74 356 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 MCPH1Q8NEM0 835 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 LRRC15Q8TF66 581 aa21.11■□□□□ 0.97
SNX4-203ENST00000471751 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNX4-203ENST00000471751 MOXD2PA6NHM9 499 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 MAGEB2O15479 319 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 SCP2P22307 547 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 AFMP43652 599 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 PSMD2Q13200 908 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 XKR9Q5GH70 373 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 CT47A1Q5JQC4 288 aaPredicted RBP21.1■□□□□ 0.97
SNX4-203ENST00000471751 CCSAPQ6IQ19 270 aaPredicted RBP21.1■□□□□ 0.97
SNX4-203ENST00000471751 PADI6Q6TGC4 694 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 DDX12PQ92771 950 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 SMARCE1Q969G3 411 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 CEP170P1Q96L14 293 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 MTG1Q9BT17 334 aaPredicted RBP21.1■□□□□ 0.97
SNX4-203ENST00000471751 TELO2Q9Y4R8 837 aa21.1■□□□□ 0.97
SNX4-203ENST00000471751 NRCAMQ92823 1304 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 MYMKA6NI61 221 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 SORBS3O60504 671 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 RTP1P59025 263 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 PURAQ00577 322 aaKnown RBP21.09■□□□□ 0.97
SNX4-203ENST00000471751 CAMK4Q16566 473 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 UNC13DQ70J99 1090 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 GPBP1Q86WP2 473 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 DHX33Q9H6R0 707 aaKnown RBP21.09■□□□□ 0.97
SNX4-203ENST00000471751 PDLIM7Q9NR12 457 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 SEL1LQ9UBV2 794 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 PCDHA5Q9Y5H7 936 aa21.09■□□□□ 0.97
SNX4-203ENST00000471751 FRMD3A2A2Y4 597 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 CAVIN2O95810 425 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 PPP1R2P41236 205 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 ARSHQ5FYA8 562 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 CCDC65Q8IXS2 484 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 SLC17A8Q8NDX2 589 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 SLC7A3Q8WY07 619 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 DNAJC19Q96DA6 116 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 CEP89Q96ST8 783 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 SEPT9Q9UHD8 586 aaPredicted RBP21.08■□□□□ 0.97
SNX4-203ENST00000471751 COL4A3BPQ9Y5P4 624 aa21.08■□□□□ 0.97
SNX4-203ENST00000471751 SCN10AQ9Y5Y9 1956 aa21.08■□□□□ 0.96
SNX4-203ENST00000471751 RHOBTB3O94955 611 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 RPLP2P05387 115 aaKnown RBP21.07■□□□□ 0.96
SNX4-203ENST00000471751 SSBP05455 408 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNX4-203ENST00000471751 GNAT1P11488 350 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 GAP43P17677 238 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 ABCD1P33897 745 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 GIT2Q14161 759 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 ZSCAN23Q3MJ62 389 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 SH3TC2Q8TF17 1288 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 KAT2BQ92831 832 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 KIFAP3Q92845 792 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 ZNF333Q96JL9 665 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 DRC1Q96MC2 740 aa21.07■□□□□ 0.96
SNX4-203ENST00000471751 IGKV6-21A0A0C4DH24 114 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 ZBTB39O15060 712 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 MAFO75444 373 aaPredicted RBP21.06■□□□□ 0.96
SNX4-203ENST00000471751 RPN1P04843 607 aaKnown RBP21.06■□□□□ 0.96
SNX4-203ENST00000471751 KRT18P05783 430 aaKnown RBP21.06■□□□□ 0.96
SNX4-203ENST00000471751 MAPTP10636 758 aaKnown RBP21.06■□□□□ 0.96
SNX4-203ENST00000471751 ZNF131P52739 623 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 ZNF445P59923 1031 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 CDC42EP1Q00587 391 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 PTPN11Q06124 597 aaPredicted RBP21.06■□□□□ 0.96
SNX4-203ENST00000471751 PNOCQ13519 176 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 CUL4BQ13620 913 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 LRRC41Q15345 812 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 SASS6Q6UVJ0 657 aa21.06■□□□□ 0.96
SNX4-203ENST00000471751 SESTD1Q86VW0 696 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms