RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RUSC1Q9BVN2 902 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 NRBP2Q9NSY0 501 aa21.4■■□□□ 1.02
PSPC1-203ENST00000471658 BMP2KQ9NSY1 1161 aaPredicted RBP21.4■■□□□ 1.02
PSPC1-203ENST00000471658 CYP11B2P19099 503 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 PURAQ00577 322 aaKnown RBP21.39■■□□□ 1.01
PSPC1-203ENST00000471658 RAD51AP2Q09MP3 1159 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 POSTNQ15063 836 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 RINT1Q6NUQ1 792 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 CXCL17Q6UXB2 119 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 OTUD6AQ7L8S5 288 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 DYMQ7RTS9 669 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 ATP8B4Q8TF62 1192 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 TNMDQ9H2S6 317 aa21.39■■□□□ 1.01
PSPC1-203ENST00000471658 MYH9P35579 1960 aaKnown RBP21.39■■□□□ 1.01
PSPC1-203ENST00000471658 F2P00734 622 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 ASGR1P07306 291 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 CACNB1Q02641 598 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-203ENST00000471658 KANK3Q6NY19 840 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 TRAPPC12Q8WVT3 735 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 NIFKQ9BYG3 293 aaKnown RBP21.38■■□□□ 1.01
PSPC1-203ENST00000471658 GZF1Q9H116 711 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-203ENST00000471658 MAGEF1Q9HAY2 307 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 CYP26B1Q9NR63 512 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 TRPC6Q9Y210 931 aa21.38■■□□□ 1.01
PSPC1-203ENST00000471658 CST5P28325 142 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 PSEN2P49810 448 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 SLC26A2P50443 739 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 TARBP2Q15633 366 aaKnown RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 KIAA0753Q2KHM9 967 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 C1orf186Q6ZWK4 172 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 ELOA2Q8IYF1 753 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 BBXQ8WY36 941 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 DDX12PQ92771 950 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 ARMC5Q96C12 935 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 CEP89Q96ST8 783 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 TRIM9Q9C026 710 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 ZNF215Q9UL58 517 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 ZBTB42B2RXF5 422 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 GTPBP6O43824 516 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 USO1O60763 962 aaKnown RBP21.37■■□□□ 1.01
PSPC1-203ENST00000471658 DPYDQ12882 1025 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 MFSD10Q14728 455 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 MAEAQ7L5Y9 396 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 RNF180Q86T96 592 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 ZBTB10Q96DT7 871 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 FAM167AQ96KS9 214 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 C7orf25Q9BPX7 421 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 PCDHA5Q9Y5H7 936 aa21.37■■□□□ 1.01
PSPC1-203ENST00000471658 HAS3O00219 553 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 ZEB2O60315 1214 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 HBP1O60381 514 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 INSRRP14616 1297 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 AMPD3Q01432 767 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 SYAP1Q96A49 352 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-203ENST00000471658 DNAJC19Q96DA6 116 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 CCDC43Q96MW1 224 aaKnown RBP21.36■■□□□ 1.01
PSPC1-203ENST00000471658 MTG1Q9BT17 334 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-203ENST00000471658 MCOLN1Q9GZU1 580 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 BRCA2P51587 3418 aa21.36■■□□□ 1.01
PSPC1-203ENST00000471658 KPNA6O60684 536 aa21.35■■□□□ 1.01
PSPC1-203ENST00000471658 IGBP1P78318 339 aa21.35■■□□□ 1.01
PSPC1-203ENST00000471658 GIT2Q14161 759 aa21.35■■□□□ 1.01
PSPC1-203ENST00000471658 RSPH10B2B2RC85 870 aa21.34■■□□□ 1.01
PSPC1-203ENST00000471658 RSPH10BP0C881 870 aa21.34■■□□□ 1.01
PSPC1-203ENST00000471658 SOX10P56693 466 aa21.34■■□□□ 1.01
PSPC1-203ENST00000471658 ASIC1P78348 528 aa21.34■■□□□ 1.01
PSPC1-203ENST00000471658 PCSK9Q8NBP7 692 aaKnown RBP21.34■■□□□ 1.01
PSPC1-203ENST00000471658 KIAA1468Q9P260 1216 aa21.34■■□□□ 1.01
PSPC1-203ENST00000471658 HOOK1Q9UJC3 728 aaKnown RBP21.34■■□□□ 1.01
PSPC1-203ENST00000471658 SFI1A8K8P3 1242 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 KLRC4O43908 158 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 KRT18P05783 430 aaKnown RBP21.33■■□□□ 1.01
PSPC1-203ENST00000471658 SMIM10L2AP0DMW4 78 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 SMIM10L2BP0DMW5 78 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 ACLYP53396 1101 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 HIC1Q14526 733 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 ZSCAN23Q3MJ62 389 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 ISM2Q6H9L7 571 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 RBM43Q6ZSC3 357 aaKnown RBP21.33■■□□□ 1.01
PSPC1-203ENST00000471658 CCDC34Q96HJ3 373 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 REEP2Q9BRK0 252 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 XPNPEP1Q9NQW7 623 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 PDLIM7Q9NR12 457 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 SETD4Q9NVD3 440 aa21.33■■□□□ 1.01
PSPC1-203ENST00000471658 FRMPD3Q5JV73 1810 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 BIN1O00499 593 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 NBPF20Q3BBV1 942 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 ZNF484Q5JVG2 852 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 ARRDC4Q8NCT1 418 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 LRRC27Q9C0I9 530 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 GPRC5CQ9NQ84 441 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1
PSPC1-203ENST00000471658 RPN1P04843 607 aaKnown RBP21.32■■□□□ 1
PSPC1-203ENST00000471658 IDEP14735 1019 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 SARSP49591 514 aaKnown RBP21.32■■□□□ 1
PSPC1-203ENST00000471658 PPFIA1Q13136 1202 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 GRIK4Q16099 956 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 CNNM4Q6P4Q7 775 aa21.32■■□□□ 1
PSPC1-203ENST00000471658 DAW1Q8N136 415 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms