RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 RESTQ13127 1097 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 PDIA5Q14554 519 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 IER5Q5VY09 327 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 ANO5Q75V66 913 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 OTUD6AQ7L8S5 288 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 ZBTB10Q96DT7 871 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SDC3-203ENST00000471567 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
SDC3-203ENST00000471567 FAM49AQ9H0Q0 323 aaPredicted RBP17.13■□□□□ 0.33
SDC3-203ENST00000471567 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
SDC3-203ENST00000471567 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
SDC3-203ENST00000471567 STK24Q9Y6E0 443 aa17.13■□□□□ 0.33
SDC3-203ENST00000471567 POTEMA6NI47 508 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 CHRNA1P02708 482 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 CTSHP09668 335 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 MRPS6P82932 125 aaKnown RBP17.12■□□□□ 0.33
SDC3-203ENST00000471567 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 MGAT3Q09327 533 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
SDC3-203ENST00000471567 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
SDC3-203ENST00000471567 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 CEP89Q96ST8 783 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
SDC3-203ENST00000471567 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
SDC3-203ENST00000471567 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
SDC3-203ENST00000471567 M0QZ92 97 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 XRCC6P12956 609 aaKnown RBP eCLIP17.11■□□□□ 0.33
SDC3-203ENST00000471567 MUTP22033 750 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 TMOD1P28289 359 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 YWHABP31946 246 aaKnown RBP17.11■□□□□ 0.33
SDC3-203ENST00000471567 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 BECN1Q14457 450 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 MTERF2Q49AM1 385 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 CNKSR3Q6P9H4 555 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 LINC01465Q8N7H1 131 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
SDC3-203ENST00000471567 CYP26B1Q9NR63 512 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 LRWD1Q9UFC0 647 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 CDY2AQ9Y6F7 541 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 KDM3AQ9Y4C1 1321 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
SDC3-203ENST00000471567 IGKV6-21A0A0C4DH24 114 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 BAIAP3O94812 1187 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 RPA1P27694 616 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 METTL13Q8N6R0 699 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 CELF4Q9BZC1 486 aaKnown RBP17.1■□□□□ 0.33
SDC3-203ENST00000471567 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 TRPV2Q9Y5S1 764 aa17.1■□□□□ 0.33
SDC3-203ENST00000471567 TMEM150BA6NC51 233 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 EFCAB14O75071 495 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
SDC3-203ENST00000471567 RFC5P40937 340 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 IL17AQ16552 155 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 FAM43BQ6ZT52 329 aaPredicted RBP17.09■□□□□ 0.33
SDC3-203ENST00000471567 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 USP38Q8NB14 1042 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 SEPT8Q92599 483 aa17.09■□□□□ 0.33
SDC3-203ENST00000471567 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
SDC3-203ENST00000471567 TET1Q8NFU7 2136 aa17.08■□□□□ 0.33
SDC3-203ENST00000471567 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
SDC3-203ENST00000471567 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
SDC3-203ENST00000471567 MED24O75448 989 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 DNM2P50570 870 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 CLCN3P51790 818 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 NPEPPSP55786 919 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 CDC42EP1Q00587 391 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 IKBKEQ14164 716 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
SDC3-203ENST00000471567 XKR9Q5GH70 373 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 FBXO47Q5MNV8 452 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 DBF4BQ8NFT6 615 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 APBB2Q92870 758 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 NACC1Q96RE7 527 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 SH2D3AQ9BRG2 576 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
SDC3-203ENST00000471567 SUGCTQ9HAC7 445 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 EVPLQ92817 2033 aa17.08■□□□□ 0.32
SDC3-203ENST00000471567 ZBBXA8MT70 800 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms