RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ADAM7Q9H2U9 754 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 TMX1Q9H3N1 280 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 NGRNQ9NPE2 291 aaKnown RBP7.9□□□□□ -1.14
HDAC1-204ENST00000471488 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 HCFC2Q9Y5Z7 792 aa7.9□□□□□ -1.14
HDAC1-204ENST00000471488 TTC3P53804 2025 aa7.9□□□□□ -1.15
HDAC1-204ENST00000471488 CACNA1HO95180 2353 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 GSTTP1A0A1W2PQM5 241 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 ERICH2A1L162 156 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 NT5C1B-RDH14C9J2C7 533 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 BACH1O14867 736 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 FSCN2O14926 492 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CXCL14O95715 111 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 AOC1P19801 751 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 METAP2P50579 478 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 MTMR1Q13613 665 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 KCNT2Q6UVM3 1135 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 SLC24A5Q71RS6 500 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CABP7Q86V35 215 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CCDC105Q8IYK2 499 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 PLCD3Q8N3E9 789 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CHAMP1Q96JM3 812 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 RTP3Q9BQQ7 232 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 KRT23Q9C075 422 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CYP26B1Q9NR63 512 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 DIAPH3Q9NSV4 1193 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 RNF216Q9NWF9 866 aaPredicted RBP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 CA14Q9ULX7 337 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 ST3GAL5Q9UNP4 418 aa7.89□□□□□ -1.15
HDAC1-204ENST00000471488 NOC2LQ9Y3T9 749 aaKnown RBP7.89□□□□□ -1.15
HDAC1-204ENST00000471488 DCHS1Q96JQ0 3298 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 RIF1Q5UIP0 2472 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 ZMYM6O95789 1325 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 FAM186AA6NE01 2351 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 PNMA6FA0A0J9YX94 578 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 MBLAC1A4D2B0 266 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 DDX39AO00148 427 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 IFIT3O14879 490 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 GPR182O15218 404 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 CLASP2O75122 1294 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SSBP05455 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 DCNP07585 359 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 EPCAMP16422 314 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 KLRC1P26715 233 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 GBP2P32456 591 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 PPM1AP35813 382 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 KIZQ2M2Z5 673 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 LONRF3Q496Y0 759 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 XRRA1Q6P2D8 792 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 TMEM184AQ6ZMB5 413 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 CKAP2LQ8IYA6 745 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SAMD3Q8N6K7 520 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 METTL13Q8N6R0 699 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 CDHR1Q96JP9 859 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 ZNF668Q96K58 619 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SCLT1Q96NL6 688 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 OSMRQ99650 979 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SENP7Q9BQF6 1050 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 CWH43Q9H720 699 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 CDHR5Q9HBB8 845 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 JPH1Q9HDC5 661 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 C1orf112Q9NSG2 853 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SPG21Q9NZD8 308 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 NCDNQ9UBB6 729 aa7.88□□□□□ -1.15
HDAC1-204ENST00000471488 SEC63Q9UGP8 760 aaKnown RBP7.88□□□□□ -1.15
HDAC1-204ENST00000471488 MYO10Q9HD67 2058 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 SPDYE3A6NKU9 549 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 NARSO43776 548 aaKnown RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 ZC3H11AO75152 810 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 EOMESO95936 686 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 VTNP04004 478 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 RPLP2P05387 115 aaKnown RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 KCNA2P16389 499 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 ZSCAN20P17040 1043 aaPredicted RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 STAT5BP51692 787 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 PDE1AP54750 535 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 GHRHRQ02643 423 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 TRDNQ13061 729 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 TDGQ13569 410 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 UBE2SQ16763 222 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 ODR4Q5SWX8 454 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 MTHFD1LQ6UB35 978 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 CCDC149Q6ZUS6 474 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 CYB5R4Q7L1T6 521 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 CRIPAKQ8N1N5 446 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 LRRC43Q8N309 656 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 ST13P5Q8NFI4 369 aaPredicted RBP7.87□□□□□ -1.15
HDAC1-204ENST00000471488 FEZF2Q8TBJ5 459 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 HELQQ8TDG4 1101 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 RSAD2Q8WXG1 361 aa7.87□□□□□ -1.15
HDAC1-204ENST00000471488 RUBCNQ92622 972 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms