RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZNF888P0CJ79 500 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 TMEM132BQ14DG7 1078 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 TMEM200BQ69YZ2 307 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 UBE2R2Q712K3 238 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 HOMER1Q86YM7 354 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 E2F7Q96AV8 911 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 MAGEC2Q9UBF1 373 aaPredicted RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 TNPO3Q9Y5L0 923 aaKnown RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 PPP1R12AO14974 1030 aaPredicted RBP8.19□□□□□ -1.1
CCDC39-202ENST00000471307 ASMTLO95671 621 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 ZNF20P17024 532 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 ZXDCQ2QGD7 858 aaPredicted RBP8.19□□□□□ -1.1
CCDC39-202ENST00000471307 RNPC3Q96LT9 517 aaKnown RBP8.19□□□□□ -1.1
CCDC39-202ENST00000471307 LMF1Q96S06 567 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 FOXB1Q99853 325 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 PIF1Q9H611 641 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 ACSS2Q9NR19 701 aa8.19□□□□□ -1.1
CCDC39-202ENST00000471307 A0A0G2JNJ9 132 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 PRAMEF22A3QJZ6 481 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-202ENST00000471307 RAC3P60763 192 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 MAP3K12Q12852 859 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 PABPC4Q13310 644 aaKnown RBP eCLIP8.18□□□□□ -1.1
CCDC39-202ENST00000471307 NFYCQ13952 458 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 OTOP2Q7RTS6 562 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 CDK5RAP1Q96SZ6 601 aaKnown RBP8.18□□□□□ -1.1
CCDC39-202ENST00000471307 ORAI3Q9BRQ5 295 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 SEMA4AQ9H3S1 761 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 CD248Q9HCU0 757 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 Q9UFV3 132 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 ABCC9O60706 1549 aa8.18□□□□□ -1.1
CCDC39-202ENST00000471307 TRAF5O00463 557 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 CYP17A1P05093 508 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
CCDC39-202ENST00000471307 CD83Q01151 205 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 ALDH6A1Q02252 535 aaKnown RBP8.17□□□□□ -1.1
CCDC39-202ENST00000471307 ZNF460Q14592 562 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 ICAM4Q14773 271 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 GRAMD4Q6IC98 578 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 LRSAM1Q6UWE0 723 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-202ENST00000471307 APPBP2Q92624 585 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 NEIL1Q96FI4 390 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-202ENST00000471307 PTPN18Q99952 460 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 KRTAP4-11Q9BYQ6 195 aa8.17□□□□□ -1.1
CCDC39-202ENST00000471307 PTPDC1A2A3K4 754 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 SDSP20132 328 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 ADCY8P40145 1251 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 KCNQ1P51787 676 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 KIF11P52732 1056 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 MOGSQ13724 837 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 PIK3R6Q5UE93 754 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 C16orf86Q6ZW13 317 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 NME9Q86XW9 330 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 FOXRED1Q96CU9 486 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-202ENST00000471307 B4GALT6Q9UBX8 382 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 ST6GALNAC2Q9UJ37 374 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 PTPN22Q9Y2R2 807 aa8.16□□□□□ -1.1
CCDC39-202ENST00000471307 ZCCHC6Q5VYS8 1495 aaKnown RBP8.15□□□□□ -1.1
CCDC39-202ENST00000471307 H7C1D1 291 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 CBX4O00257 560 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 JMJD7P0C870 316 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 ZNF174Q15697 407 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 AGBL4Q5VU57 503 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 KIF18BQ86Y91 864 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 PCIF1Q9H4Z3 704 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 TSC22D4Q9Y3Q8 395 aa8.15□□□□□ -1.1
CCDC39-202ENST00000471307 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 ZNF623O75123 536 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 KRT37O76014 449 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 SELENOPP49908 381 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 MEOX1P50221 254 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 RRADP55042 308 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 CFAP100Q494V2 611 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 CDCA2Q69YH5 1023 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-202ENST00000471307 USP30Q70CQ3 517 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 GGNQ86UU5 652 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 LRRC37BQ96QE4 947 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 KRTAP4-2Q9BYR5 136 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 KLC2Q9H0B6 622 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 DEF6Q9H4E7 631 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 OAZ3Q9UMX2 235 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 VWA7Q9Y334 891 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 NR2E1Q9Y466 385 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 TCAF1Q9Y4C2 921 aa8.14□□□□□ -1.11
CCDC39-202ENST00000471307 DVL2O14641 736 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 PRLP01236 227 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 CR2P20023 1033 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 POU3F2P20265 443 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-202ENST00000471307 ROM1Q03395 351 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 HS1BP3Q53T59 392 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 TCTN3Q6NUS6 607 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 GIMAP8Q8ND71 665 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-202ENST00000471307 Q8TCH9 128 aa8.13□□□□□ -1.11
CCDC39-202ENST00000471307 ERCC4Q92889 916 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-202ENST00000471307 NINJ1Q92982 152 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms