RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 DEFB128Q7Z7B8 93 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 C4orf19Q8IY42 314 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 HSD17B14Q9BPX1 270 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 SMIM35A0A1B0GVV1 85 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 DDX11L8A8MPP1 907 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 RSPH10B2B2RC85 870 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 NBNO60934 754 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 SLITRK3O94933 977 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 PFKMP08237 780 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 RSPH10BP0C881 870 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 MGAT3Q09327 533 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 BECN1Q14457 450 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 IL17AQ16552 155 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 FAM26DQ5JW98 314 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 FAM173BQ6P4H8 233 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 RSPH3Q86UC2 560 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 CEP89Q96ST8 783 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 SH2D3AQ9BRG2 576 aa22.13■■□□□ 1.13
HDAC7-220ENST00000471235 PARNO95453 639 aaKnown RBP22.12■■□□□ 1.13
HDAC7-220ENST00000471235 MRPS6P82932 125 aaKnown RBP22.12■■□□□ 1.13
HDAC7-220ENST00000471235 ZNF365Q70YC5 407 aa22.12■■□□□ 1.13
HDAC7-220ENST00000471235 TPH2Q8IWU9 490 aa22.12■■□□□ 1.13
HDAC7-220ENST00000471235 RPUSD2Q8IZ73 545 aaKnown RBP22.12■■□□□ 1.13
HDAC7-220ENST00000471235 LINC01465Q8N7H1 131 aa22.12■■□□□ 1.13
HDAC7-220ENST00000471235 IGSF22Q8N9C0 903 aa22.12■■□□□ 1.13
HDAC7-220ENST00000471235 FTOQ9C0B1 505 aaKnown RBP eCLIP22.12■■□□□ 1.13
HDAC7-220ENST00000471235 ZSCAN16Q9H4T2 348 aaPredicted RBP22.12■■□□□ 1.13
HDAC7-220ENST00000471235 MYH11P35749 1972 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 MAGEB2O15479 319 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 MED24O75448 989 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 LYPLA2O95372 231 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 CHRNA1P02708 482 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 CXCL10P02778 98 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 RPLP2P05387 115 aaKnown RBP22.11■■□□□ 1.13
HDAC7-220ENST00000471235 SPATA31C1P0DKV0 1188 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 YWHABP31946 246 aaKnown RBP22.11■■□□□ 1.13
HDAC7-220ENST00000471235 CLCN3P51790 818 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 PKP1Q13835 747 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 SF3A1Q15459 793 aaKnown RBP22.11■■□□□ 1.13
HDAC7-220ENST00000471235 DTHD1Q6ZMT9 781 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 ERMNQ8TAM6 284 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 OSBPL7Q9BZF2 842 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 TUFT1Q9NNX1 390 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 LRWD1Q9UFC0 647 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 CDY2AQ9Y6F7 541 aa22.11■■□□□ 1.13
HDAC7-220ENST00000471235 BMP15O95972 392 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 ZSCAN22P10073 491 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 NPEPPSP55786 919 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 TBC1D8BQ0IIM8 1120 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 TMEM62Q0P6H9 643 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 HABP4Q5JVS0 413 aaKnown RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 FOXD4L5Q5VV16 416 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 ARL6IP4Q66PJ3 421 aaKnown RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 HAUS3Q68CZ6 603 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 KIAA0319LQ8IZA0 1049 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 LRRC71Q8N4P6 559 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 FOXD4L4Q8WXT5 416 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 RNPC3Q96LT9 517 aaKnown RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 POLR3CQ9BUI4 534 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-220ENST00000471235 RAB34Q9BZG1 259 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 CYP26B1Q9NR63 512 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 TRPV2Q9Y5S1 764 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 CLIC4Q9Y696 253 aa22.1■■□□□ 1.13
HDAC7-220ENST00000471235 PP2D1A8MPX8 630 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 ZBTB39O15060 712 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 FGBP02675 491 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 PDIA4P13667 645 aaKnown RBP22.09■■□□□ 1.13
HDAC7-220ENST00000471235 RPA1P27694 616 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 PDIA5Q14554 519 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 TCTN1Q2MV58 587 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 EFCAB12Q6NXP0 572 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 POTEGQ6S5H5 508 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 CATSPER3Q86XQ3 398 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 METTL13Q8N6R0 699 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 ZNF579Q8NAF0 562 aaKnown RBP22.09■■□□□ 1.13
HDAC7-220ENST00000471235 HERVK_113Q902F9 699 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 CEP170P1Q96L14 293 aa22.09■■□□□ 1.13
HDAC7-220ENST00000471235 VWA3AA6NCI4 1184 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 F13A1P00488 732 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 PTPAQ15257 358 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 RASIP1Q5U651 963 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 OTOP2Q7RTS6 562 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 NME8Q8N427 588 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 PPME1Q9Y570 386 aa22.08■■□□□ 1.13
HDAC7-220ENST00000471235 KDM3AQ9Y4C1 1321 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 IGKV6-21A0A0C4DH24 114 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 M0QZ92 97 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 MAFO75444 373 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-220ENST00000471235 VTNP04004 478 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 CCT6AP40227 531 aaKnown RBP22.07■■□□□ 1.12
HDAC7-220ENST00000471235 XKR9Q5GH70 373 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 IER5Q5VY09 327 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 CNKSR3Q6P9H4 555 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 OTUD6AQ7L8S5 288 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 SNX29Q8TEQ0 813 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 USP28Q96RU2 1077 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 ANKEF1Q9NU02 776 aa22.07■■□□□ 1.12
HDAC7-220ENST00000471235 CXXC1Q9P0U4 656 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-220ENST00000471235 A0A087WWV3 80 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms