RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ITGB5P18084 799 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 ICAM3P32942 547 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 CCT6AP40227 531 aaKnown RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 CDK7P50613 346 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 GJA9P57773 515 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 MTMR1Q13613 665 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 AAK1Q2M2I8 961 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 NSMFQ6X4W1 530 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 SLC30A10Q6XR72 485 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 UNC13DQ70J99 1090 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 SMAP1Q8IYB5 467 aaPredicted RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 RNF214Q8ND24 703 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 TBC1D5Q92609 795 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 PNMA5Q96PV4 448 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 MTRQ99707 1265 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 AGO4Q9HCK5 861 aaKnown RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 KCNH7Q9NS40 1196 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 BLOC1S4Q9NUP1 217 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 COL20A1Q9P218 1284 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 ZHX1Q9UKY1 873 aaPredicted RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 RIPK3Q9Y572 518 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 CDH23Q9H251 3354 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 ZNFX1Q9P2E3 1918 aaKnown RBP10.19□□□□□ -0.78
PTPRE-207ENST00000471218 LTBP2Q14767 1821 aa10.19□□□□□ -0.78
PTPRE-207ENST00000471218 SYNRGQ9UMZ2 1314 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 DNAJC25-GNG10A0A024R161 153 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 ASB14A6NK59 587 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 PP2D1A8MPX8 630 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 EYA4O95677 639 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 SCP2P22307 547 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 NKX3-2P78367 333 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 MRPS9P82933 396 aaKnown RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 SPAG1Q07617 926 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 STXBP2Q15833 593 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 C11orf57Q6ZUT1 292 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 NOC3LQ8WTT2 800 aaKnown RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 MRFAP1L1Q96HT8 127 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 DHTKD1Q96HY7 919 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-207ENST00000471218 NACC1Q96RE7 527 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 PANK2Q9BZ23 570 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 HOMER2Q9NSB8 354 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 RWDD2AQ9UIY3 292 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 NCOR1O75376 2440 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 MYO9BQ13459 2157 aa10.18□□□□□ -0.78
PTPRE-207ENST00000471218 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 FRMD3A2A2Y4 597 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 GOLGA6L6A8MZA4 724 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 WDR64B1ANS9 1081 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 PSMA7O14818 248 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CBFA2T2O43439 604 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 KLRC4O43908 158 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SNAI1O95863 264 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 FGBP02675 491 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 P4HBP07237 508 aaKnown RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 ASGR1P07306 291 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SPATA31C1P0DKV0 1188 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 ITGB8P26012 769 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CDC25AP30304 524 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 AFMP43652 599 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 EHHADHQ08426 723 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CUL4BQ13620 913 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CCSAPQ6IQ19 270 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CATSPER3Q86XQ3 398 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CCDC65Q8IXS2 484 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SYT2Q8N9I0 419 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 TAAR1Q96RJ0 339 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 EIF2AK1Q9BQI3 630 aaKnown RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 UPF3AQ9H1J1 476 aaKnown RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 ZSWIM4Q9H7M6 989 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SLC28A3Q9HAS3 691 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 THEGQ9P2T0 379 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 DBR1Q9UK59 544 aaKnown RBP10.17□□□□□ -0.78
PTPRE-207ENST00000471218 Q9Y3F1 56 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 PPME1Q9Y570 386 aa10.17□□□□□ -0.78
PTPRE-207ENST00000471218 SPATA31C2B4DYI2 1134 aa10.16□□□□□ -0.78
PTPRE-207ENST00000471218 DHX15O43143 795 aaKnown RBP10.16□□□□□ -0.78
PTPRE-207ENST00000471218 PFKMP08237 780 aa10.16□□□□□ -0.78
PTPRE-207ENST00000471218 SUPT20HL2P0C7V6 817 aa10.16□□□□□ -0.78
PTPRE-207ENST00000471218 PLA2G4BP0C869 781 aa10.16□□□□□ -0.78
PTPRE-207ENST00000471218 TAL1P17542 331 aaPredicted RBP10.16□□□□□ -0.78
PTPRE-207ENST00000471218 GAP43P17677 238 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms