RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215	BCAS3	Q9H6U6	928 aa		10.84	□□□□□ -0.67
BUD23-215	ENST00000471215	ZBTB39	O15060	712 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	C21orf2	O43822	256 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	SYF2	O95926	243 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	KRT13	P13646	458 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	PON1	P27169	355 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	PPARD	Q03181	441 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	PPFIA1	Q13136	1202 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	RINT1	Q6NUQ1	792 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	2e-6	■■■■■ 149.1
BUD23-215	ENST00000471215	AIPL1	Q9NZN9	384 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	MRPL11	Q9Y3B7	192 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	PCDHA2	Q9Y5H9	948 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	DDX60L	Q5H9U9	1706 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	MYH10	P35580	1976 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	HDLBP	Q00341	1268 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	ASTE1	Q2TB18	679 aa	Predicted RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	EMB	Q6PCB8	327 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	ARHGAP27	Q6ZUM4	889 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	SIAH1	Q8IUQ4	282 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	MSL3	Q8N5Y2	521 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	AP1M1	Q9BXS5	423 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215		A0A1W2PRG0	241 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	SLC26A4	O43511	780 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	ONECUT3	O60422	494 aa	Predicted RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	TNFAIP3	P21580	790 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	CARS	P49589	748 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	TATDN1	Q6P1N9	297 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	LARGE2	Q8N3Y3	721 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	GMCL1P1	Q8NEA9	526 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	P2RX7	Q99572	595 aa	Known RBP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	HOMER2	Q9NSB8	354 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	TRAF3IP3	Q9Y228	551 aa		10.83	□□□□□ -0.68
BUD23-215	ENST00000471215	SHTN1	A0MZ66	631 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ZEB2	O60315	1214 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	CETN1	Q12798	172 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	GLE1	Q53GS7	698 aa	Known RBP	10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	C10orf76	Q5T2E6	689 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	FOXR2	Q6PJQ5	311 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	NACC1	Q96RE7	527 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	IKZF4	Q9H2S9	585 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	COL24A1	Q17RW2	1714 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ENTPD3	O75355	529 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	CCDC172	P0C7W6	258 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	BANK1	Q8NDB2	785 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	TEKT3	Q9BXF9	490 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	GAN	Q9H2C0	597 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	PCIF1	Q9H4Z3	704 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	GOLGA8K	D6RF30	607 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	KRIT1	O00522	736 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	TRIM49	P0CI25	452 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	TRIM49C	P0CI26	452 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	FER	P16591	822 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ATP1A2	P50993	1020 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	PRELP	P51888	382 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ODF2	Q5BJF6	829 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	NAGPA	Q9UK23	515 aa		10.82	□□□□□ -0.68
BUD23-215	ENST00000471215	ANKRD65	E5RJM6	399 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	GLI1	P08151	1106 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	MARS	P56192	900 aa	Known RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	MIER3	Q7Z3K6	550 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	DNAJC12	Q9UKB3	198 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	GRID2IP	A4D2P6	1211 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215		K7ENM7	598 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	LRRN2	O75325	713 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	AARS	P49588	968 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	GNGT1	P63211	74 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	JAG1	P78504	1218 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	ITIH3	Q06033	890 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	SPIRE1	Q08AE8	756 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	CEP55	Q53EZ4	464 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	NAA35	Q5VZE5	725 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	ADAT2	Q7Z6V5	191 aa	Known RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	SUPT20H	Q8NEM7	779 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	AEN	Q8WTP8	325 aa	Known RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	MRI	Q9BWK5	157 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	CAPS2	Q9BXY5	557 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	WDR11	Q9BZH6	1224 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	TRIM31	Q9BZY9	425 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	BCS1L	Q9Y276	419 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	TMEM110-MUSTN1	A8MSY1	372 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	KIF4A	O95239	1232 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	MEI1	Q5TIA1	1274 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	GLYCTK	Q8IVS8	523 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	PLCB1	Q9NQ66	1216 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	FBXO28	Q9NVF7	368 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	AMFR	Q9UKV5	643 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	CCPG1	Q9ULG6	757 aa		10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.81	□□□□□ -0.68
BUD23-215	ENST00000471215	SLITRK3	O94933	977 aa		10.8	□□□□□ -0.68
BUD23-215	ENST00000471215	COG2	Q14746	738 aa		10.8	□□□□□ -0.68
BUD23-215	ENST00000471215	DRAP1	Q14919	205 aa	Predicted RBP	10.8	□□□□□ -0.68

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