RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 EMBQ6PCB8 327 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 PASD1Q8IV76 773 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 SLC30A5Q8TAD4 765 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 DNAJC7Q99615 494 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 TLR10Q9BXR5 811 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
CHD3-208ENST00000470531 ATF7P17544 494 aaPredicted RBP11.61□□□□□ -0.55
CHD3-208ENST00000470531 GPSM2P81274 684 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 AK8Q96MA6 479 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 VIPAS39Q9H9C1 493 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 KLHL11Q9NVR0 708 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 PPP1R37O75864 691 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ZBTB16Q05516 673 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
CHD3-208ENST00000470531 QRICH1Q2TAL8 776 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ZNF473Q8WTR7 871 aaKnown RBP11.61□□□□□ -0.55
CHD3-208ENST00000470531 C1orf54Q8WWF1 131 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 FAM167BQ9BTA0 163 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 CCSER1Q9C0I3 900 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 KBTBD4Q9NVX7 518 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 RASAL2Q9UJF2 1139 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 DNAJC12Q9UKB3 198 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 USP20Q9Y2K6 914 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ITIH6Q6UXX5 1313 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 NFAT5O94916 1531 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 TTLL1O95922 423 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 KRT15P19012 456 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 GCKP35557 465 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ADCY8P40145 1251 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ZNF394Q53GI3 561 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 RFX8Q6ZV50 586 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 NT5C3AQ9H0P0 336 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 ODF2LQ9ULJ1 636 aa11.61□□□□□ -0.55
CHD3-208ENST00000470531 EVI5O60447 810 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 SCP2P22307 547 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 FAM102BQ5T8I3 360 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 NUGGCQ68CJ6 796 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 ZNF449Q6P9G9 518 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 FBXO11Q86XK2 927 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 ZNF384Q8TF68 577 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 MYH10P35580 1976 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
CHD3-208ENST00000470531 GOLGA8SH3BPF8 625 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 GOLGA8MH3BSY2 632 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 PIAS1O75925 651 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 MMEP08473 750 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 DYNLT1P63172 113 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 FUT2Q10981 343 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 DRAP1Q14919 205 aaPredicted RBP11.6□□□□□ -0.55
CHD3-208ENST00000470531 CCDC6Q16204 474 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 KLHDC7AQ5VTJ3 777 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 FBF1Q8TES7 1133 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 LMO7Q8WWI1 1683 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 CASP5P51878 434 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 ZNF131P52739 623 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 DR1Q01658 176 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 NFIAQ12857 509 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
CHD3-208ENST00000470531 PCDHAC2Q9Y5I4 1007 aa11.6□□□□□ -0.55
CHD3-208ENST00000470531 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 KLRC4O43908 158 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 ORC4O43929 436 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 NR3C1P04150 777 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 UCHL3P15374 230 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 STX2P32856 288 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 GALCP54803 685 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 COG2Q14746 738 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 GUF1Q8N442 669 aaKnown RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 METTL13Q8N6R0 699 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 SAAL1Q96ER3 474 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 MYH13Q9UKX3 1938 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 GH2P01242 217 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 PDHBP11177 359 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 ALAS1P13196 640 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 KCNB1Q14721 858 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 ZNF365Q70YC5 407 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 TDRD3Q9H7E2 651 aaKnown RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 SUDS3Q9H7L9 328 aaPredicted RBP11.59□□□□□ -0.55
CHD3-208ENST00000470531 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 HSD17B3P37058 310 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 NPY5RQ15761 445 aa11.59□□□□□ -0.55
CHD3-208ENST00000470531 LRRC15Q8TF66 581 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms