RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 RGL2O15211 777 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 RASSF9O75901 435 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 PRKCIP41743 596 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 PICALMQ13492 652 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 SYCE1Q8N0S2 351 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
SFXN3-205ENST00000470252 SEC16BQ96JE7 1060 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 CD209Q9NNX6 404 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 STXBP5LQ9Y2K9 1186 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 UTP11Q9Y3A2 253 aaKnown RBP14.34□□□□□ -0.11
SFXN3-205ENST00000470252 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 USP17L10C9JJH3 530 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 RXRBP28702 533 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
SFXN3-205ENST00000470252 CDR1P51861 262 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
SFXN3-205ENST00000470252 SLFN11Q7Z7L1 901 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 NT5DC3Q86UY8 548 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 CACNA2D3Q8IZS8 1091 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 TRIM31Q9BZY9 425 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 TRAF3IP3Q9Y228 551 aa14.34□□□□□ -0.11
SFXN3-205ENST00000470252 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.11
SFXN3-205ENST00000470252 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L19D6RCP7 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L20D6RJB6 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 F8VZ95 297 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 CHUKO15111 745 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 GNPATO15228 680 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 IFFO1Q0D2I5 559 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L24Q0WX57 530 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 EPHA7Q15375 998 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 SPRED3Q2MJR0 410 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 GJB7Q6PEY0 223 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 ZKSCAN4Q969J2 545 aaPredicted RBP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 TRIM51Q9BSJ1 452 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 LRRC4CQ9HCJ2 640 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 GCNT4Q9P109 453 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 NRAPQ86VF7 1730 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 A0A0A6YYK5 440 aaPredicted RBP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 MEIS1O00470 390 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 ZBTB5O15062 677 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 AKAP3O75969 853 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 TTLL1O95922 423 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 GIT2Q14161 759 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 PSMD1Q99460 953 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 NAP1L4Q99733 375 aaKnown RBP14.33□□□□□ -0.12
SFXN3-205ENST00000470252 SIX2Q9NPC8 291 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 AMFRQ9UKV5 643 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 ATP8A1Q9Y2Q0 1164 aa14.33□□□□□ -0.12
SFXN3-205ENST00000470252 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 DNM1LO00429 736 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 ATP2C2O75185 946 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 RPS6KA4O75676 772 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 GFPT2O94808 682 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 UFL1O94874 794 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 FGGP02679 453 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 PAEPP09466 180 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 RFC4P35249 363 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 HOXD13P35453 343 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 JAM2P57087 298 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 PSMC6P62333 389 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.12
SFXN3-205ENST00000470252 ANKRD20A8PQ5CZ79 823 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 CPLX4Q7Z7G2 160 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
SFXN3-205ENST00000470252 CXorf56Q9H5V9 222 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
SFXN3-205ENST00000470252 C5orf60A6NFR6 353 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 ANXA13P27216 316 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 GALCP54803 685 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 GPSM2P81274 684 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 BYSLQ13895 437 aaKnown RBP14.32□□□□□ -0.12
SFXN3-205ENST00000470252 SLF2Q8IX21 1173 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 TATDN2Q93075 761 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 REEP2Q9BRK0 252 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
SFXN3-205ENST00000470252 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
SFXN3-205ENST00000470252 NR3C1P04150 777 aa14.31□□□□□ -0.12
SFXN3-205ENST00000470252 CASP4P49662 377 aa14.31□□□□□ -0.12
SFXN3-205ENST00000470252 GKAP1Q5VSY0 366 aaPredicted RBP14.31□□□□□ -0.12
SFXN3-205ENST00000470252 CATSPER3Q86XQ3 398 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms