RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 ASGR1P07306 291 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 GJB1P08034 283 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 AFMP43652 599 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 PSEN2P49810 448 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 HIC1Q14526 733 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
SREBF1-209ENST00000470247 CAMK4Q16566 473 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-209ENST00000470247 CNNM4Q6P4Q7 775 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 FAM167AQ96KS9 214 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
SREBF1-209ENST00000470247 MTG1Q9BT17 334 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-209ENST00000470247 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 MAGEF1Q9HAY2 307 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 CYP26B1Q9NR63 512 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 NRBP2Q9NSY0 501 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 GRIN2DO15399 1336 aa12.55□□□□□ -0.4
SREBF1-209ENST00000470247 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 ZEB2O60315 1214 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 SGPL1O95470 568 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 INSRRP14616 1297 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 HOXC8P31273 242 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 DPYDQ12882 1025 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 PNOCQ13519 176 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 CUL4BQ13620 913 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 MFSD10Q14728 455 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 XKR9Q5GH70 373 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 KANK3Q6NY19 840 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 OTUD6AQ7L8S5 288 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 RNF180Q86T96 592 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 PCSK9Q8NBP7 692 aaKnown RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 DHX33Q9H6R0 707 aaKnown RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
SREBF1-209ENST00000470247 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
SREBF1-209ENST00000470247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 KLRC4O43908 158 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 ACLYP53396 1101 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 ADAM17P78536 824 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 MAPK7Q13164 816 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 GIT2Q14161 759 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 POSTNQ15063 836 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 MTERF2Q49AM1 385 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 ZNF484Q5JVG2 852 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 MARCH8Q5T0T0 291 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 DAW1Q8N136 415 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 TRAPPC12Q8WVT3 735 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 DDX12PQ92771 950 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 BLZF1Q9H2G9 400 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-209ENST00000470247 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
SREBF1-209ENST00000470247 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-209ENST00000470247 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 GUCY2CP25092 1073 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 GJA8P48165 433 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 CCDC183Q5T5S1 534 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 LINC01465Q8N7H1 131 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 ZBTB10Q96DT7 871 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 SETD4Q9NVD3 440 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 PPME1Q9Y570 386 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 FRMPD3Q5JV73 1810 aa12.52□□□□□ -0.41
SREBF1-209ENST00000470247 MBLAC1A4D2B0 266 aaPredicted RBP12.51□□□□□ -0.41
SREBF1-209ENST00000470247 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
SREBF1-209ENST00000470247 DNM1LO00429 736 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms