RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SEPT7Q16181 437 aaKnown RBP5.64□□□□□ -1.51
BRCA2-202ENST00000470094 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 ERICH6BQ5W0A0 696 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 CREB3L3Q68CJ9 461 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 OTOP2Q7RTS6 562 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 PLEKHH3Q7Z736 793 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 RTN4RL1Q86UN2 441 aaPredicted RBP5.64□□□□□ -1.51
BRCA2-202ENST00000470094 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 NME9Q86XW9 330 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 PASD1Q8IV76 773 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 REXO1L1PQ8IX06 675 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 KBTBD2Q8IY47 623 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 LEO1Q8WVC0 666 aaPredicted RBP5.64□□□□□ -1.51
BRCA2-202ENST00000470094 C20orf173Q96LM9 149 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 FOXB1Q99853 325 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 TOMM22Q9NS69 142 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 FBXO10Q9UK96 956 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 ADAM29Q9UKF5 820 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 MAPRE3Q9UPY8 281 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 DUSP10Q9Y6W6 482 aa5.64□□□□□ -1.51
BRCA2-202ENST00000470094 UBA6A0AVT1 1052 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 PTX3P26022 381 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 ADCY8P40145 1251 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 KPNA1P52294 538 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 ROM1Q03395 351 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 EPHA7Q15375 998 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 RALYLQ86SE5 291 aaKnown RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 IFNL2Q8IZJ0 200 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 EFHBQ8N7U6 833 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 CHTF18Q8WVB6 975 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 FOXRED1Q96CU9 486 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 MBD6Q96DN6 1003 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 AJUBAQ96IF1 538 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 ELF4Q99607 663 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 H2AFY2Q9P0M6 372 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-202ENST00000470094 INVSQ9Y283 1065 aa5.63□□□□□ -1.51
BRCA2-202ENST00000470094 B4GALT3O60512 393 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 PRLP01236 227 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 APEX1P27695 318 aaKnown RBP5.62□□□□□ -1.51
BRCA2-202ENST00000470094 IL2P60568 153 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 CD83Q01151 205 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 SLC6A3Q01959 620 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 MAP3K12Q12852 859 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 TOP3AQ13472 1001 aaPredicted RBP5.62□□□□□ -1.51
BRCA2-202ENST00000470094 SURF1Q15526 300 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 TTC38Q5R3I4 469 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 KANK2Q63ZY3 851 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 GPR155Q7Z3F1 870 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 ZZZ3Q8IYH5 903 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 SMC1BQ8NDV3 1235 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 RELTQ969Z4 430 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 GPR101Q96P66 508 aaPredicted RBP5.62□□□□□ -1.51
BRCA2-202ENST00000470094 CARD11Q9BXL7 1154 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 KATNBL1Q9H079 304 aa5.62□□□□□ -1.51
BRCA2-202ENST00000470094 PRICKLE3O43900 615 aaPredicted RBP5.61□□□□□ -1.51
BRCA2-202ENST00000470094 CSF2RBP32927 897 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ETV4P43268 484 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 KCNQ1P51787 676 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 MOGSQ13724 837 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 USP10Q14694 798 aaKnown RBP5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ZNF568Q3ZCX4 644 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 PRAMEF9Q5VWM5 478 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 GRAMD4Q6IC98 578 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 SLFN12LQ6IEE8 588 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ESRP1Q6NXG1 681 aaKnown RBP5.61□□□□□ -1.51
BRCA2-202ENST00000470094 C11orf74Q86VG3 221 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 THNSL2Q86YJ6 484 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 C7orf31Q8N865 590 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 MAML3Q96JK9 1138 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 SCYL1Q96KG9 808 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ZDHHC5Q9C0B5 715 aa5.61□□□□□ -1.51
BRCA2-202ENST00000470094 ZNF536O15090 1300 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 LAMTOR5O43504 91 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 B4GALT4O60513 344 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 HMGCRP04035 888 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 SYN1P17600 705 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 CD40P25942 277 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 SOX5P35711 763 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 STAT3P40763 770 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 LSSP48449 732 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 MASP1P48740 699 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 RGS3P49796 1198 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 EIF4HQ15056 248 aaKnown RBP5.6□□□□□ -1.51
BRCA2-202ENST00000470094 EGFLAMQ63HQ2 1017 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 TIGD7Q6NT04 549 aaPredicted RBP5.6□□□□□ -1.51
BRCA2-202ENST00000470094 ARHGEF18Q6ZSZ5 1173 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 DDX46Q7L014 1031 aaKnown RBP5.6□□□□□ -1.51
BRCA2-202ENST00000470094 RNF180Q86T96 592 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 PHYKPLQ8IUZ5 450 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 CXorf38Q8TB03 319 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 CHAC2Q8WUX2 184 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 USP7Q93009 1102 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 CAAP1Q9H8G2 361 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms