RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PLCG1P19174 1290 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 RTP1P59025 263 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 MTERF2Q49AM1 385 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 ADALQ6DHV7 355 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 NIFKQ9BYG3 293 aaKnown RBP16.53■□□□□ 0.24
COL9A3-209ENST00000469852 PANK2Q9BZ23 570 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
COL9A3-209ENST00000469852 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 PQBP1O60828 265 aaKnown RBP16.52■□□□□ 0.24
COL9A3-209ENST00000469852 GADD45BO75293 160 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-209ENST00000469852 MUTP22033 750 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 C1orf53Q5VUE5 145 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 RUFY4Q6ZNE9 571 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 PDILTQ8N807 584 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 WNT8BQ93098 351 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 CYP26B1Q9NR63 512 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 NRBP2Q9NSY0 501 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-209ENST00000469852 BLOC1S4Q9NUP1 217 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 STK24Q9Y6E0 443 aa16.52■□□□□ 0.24
COL9A3-209ENST00000469852 EVPLQ92817 2033 aa16.52■□□□□ 0.23
COL9A3-209ENST00000469852 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 H0YGN5 161 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 DKC1O60832 514 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL9A3-209ENST00000469852 C22orf31O95567 290 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 CD4P01730 458 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 RARRES1P49788 294 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 TLE2Q04725 743 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 PTPN11Q06124 597 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-209ENST00000469852 PTGISQ16647 500 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 NAALADL2Q58DX5 795 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 ANKRD33Q7Z3H0 272 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
COL9A3-209ENST00000469852 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 CDK5RAP3Q96JB5 506 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 CEP170P1Q96L14 293 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 NACC1Q96RE7 527 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 COL1A2P08123 1366 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 LOXHD1Q8IVV2 1947 aa16.51■□□□□ 0.23
COL9A3-209ENST00000469852 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-209ENST00000469852 CYP2C9P11712 490 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 PFKFB1P16118 471 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 CMA1P23946 247 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 KLRC1P26715 233 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 FAAP100Q0VG06 881 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 E2F4Q16254 413 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 NT5C3AQ9H0P0 336 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 BHMT2Q9H2M3 363 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 ANKEF1Q9NU02 776 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
COL9A3-209ENST00000469852 HPSEQ9Y251 543 aa16.5■□□□□ 0.23
COL9A3-209ENST00000469852 A0A1W2PQ27 194 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 A0A1W2PQ64 194 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 A0A1W2PQD8 194 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 RRN3P2A6NIE6 340 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 CEP290O15078 2479 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 SLC26A4O43511 780 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 EYA4O95677 639 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 TXLNAP40222 546 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 NDUFA8P51970 172 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
COL9A3-209ENST00000469852 DRP2Q13474 957 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 MCM6Q14566 821 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 OTUD6AQ7L8S5 288 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 LRRC71Q8N4P6 559 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 FSIP1Q8NA03 581 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 XPNPEP1Q9NQW7 623 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 DNM3Q9UQ16 869 aa16.49■□□□□ 0.23
COL9A3-209ENST00000469852 SIP14410 1827 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 MAFO75444 373 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 PLA2G4BP0C869 781 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 CLCN3P51790 818 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 SERINC5Q86VE9 423 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
COL9A3-209ENST00000469852 RAD54LQ92698 747 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 DHX58Q96C10 678 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
COL9A3-209ENST00000469852 SEZ6LQ9BYH1 1024 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms