RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 MAGOHP61326 146 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 GPSM2P81274 684 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 BIRC3Q13489 604 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 FUKQ8N0W3 1084 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 MAGOHBQ96A72 148 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 GPR88Q9GZN0 384 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 MTFR1LQ9H019 292 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 PPP1R9AQ9ULJ8 1098 aa11.23□□□□□ -0.61
SMC4-210ENST00000469762 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
SMC4-210ENST00000469762 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 MICALCLQ6ZW33 695 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 CCT6BQ92526 530 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 TAF4BQ92750 862 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 MBOAT7Q96N66 472 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 ZNF287Q9HBT7 754 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
SMC4-210ENST00000469762 PPFIA2O75334 1257 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 PPATQ06203 517 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 GPATCH11Q8N954 259 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 UBLCP1Q8WVY7 318 aaPredicted RBP11.22□□□□□ -0.61
SMC4-210ENST00000469762 ZNF317Q96PQ6 595 aaPredicted RBP11.22□□□□□ -0.61
SMC4-210ENST00000469762 CXorf56Q9H5V9 222 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 ATP8B3O60423 1300 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 FAM170AA1A519 330 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 OPLAHO14841 1288 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 IL1R1P14778 569 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 LACTB2Q53H82 288 aaPredicted RBP11.22□□□□□ -0.61
SMC4-210ENST00000469762 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 LRRC45Q96CN5 670 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
SMC4-210ENST00000469762 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
SMC4-210ENST00000469762 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 H0YHG0 523 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 CETN3O15182 167 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 CAND2O75155 1236 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 AFPP02771 609 aaKnown RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 LDHCP07864 332 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 DRP2Q13474 957 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 GRAPQ13588 217 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 EXOC3L4Q17RC7 722 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 ZDHHC14Q8IZN3 488 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 LENG9Q96B70 501 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 DPH5Q9H2P9 285 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 TTC7AQ9ULT0 858 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 UBAP1LF5GYI3 381 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 CCDC188H7C350 402 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 MEIS1O00470 390 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 GALCP54803 685 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 DHX9Q08211 1270 aaKnown RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 PALB2Q86YC2 1186 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 HAUS2Q9NVX0 235 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMC4-210ENST00000469762 ARMCX3Q9UH62 379 aaPredicted RBP11.21□□□□□ -0.61
SMC4-210ENST00000469762 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
SMC4-210ENST00000469762 CYP3A7-CYP3A51PA0A087WV96 503 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 TGFB1I1O43294 461 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 RPS6KA4O75676 772 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 CYP3A7P24462 503 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 SCTRP47872 440 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.62
SMC4-210ENST00000469762 PREPLQ4J6C6 727 aaPredicted RBP11.21□□□□□ -0.62
SMC4-210ENST00000469762 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 CYB5D1Q6P9G0 228 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 ZDHHC24Q6UX98 284 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 KCTD1Q719H9 257 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 PEX26Q7Z412 305 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.62
SMC4-210ENST00000469762 MCM8Q9UJA3 840 aa11.21□□□□□ -0.62
SMC4-210ENST00000469762 BZW2Q9Y6E2 419 aaKnown RBP11.21□□□□□ -0.62
SMC4-210ENST00000469762 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
SMC4-210ENST00000469762 SMCHD1A6NHR9 2005 aa11.2□□□□□ -0.62
SMC4-210ENST00000469762 KLRC3Q07444 240 aa11.2□□□□□ -0.62
SMC4-210ENST00000469762 DUPD1Q68J44 220 aa11.2□□□□□ -0.62
SMC4-210ENST00000469762 AADACL2Q6P093 401 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms