RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HIP1RO75146 1068 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 CNMDO75829 334 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 TRIM21P19474 475 aaKnown RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 FECHP22830 423 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 NR2F2P24468 414 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 CASP14P31944 242 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 ABCD1P33897 745 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 RARRES1P49788 294 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 GTF2A2P52657 109 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 RBL2Q08999 1139 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 KCTD2Q14681 263 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 VWA3BQ502W6 1294 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 ODR4Q5SWX8 454 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 KCNV1Q6PIU1 500 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 MOB2Q70IA6 237 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 HS2ST1Q7LGA3 356 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 TMEM139Q8IV31 216 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 C17orf53Q8N3J3 647 aaPredicted RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 ZNF397Q8NF99 534 aaPredicted RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 HVCN1Q96D96 273 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 PRIMPOLQ96LW4 560 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 NDST4Q9H3R1 872 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 METTL14Q9HCE5 456 aaKnown RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 ABHD10Q9NUJ1 306 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 CGNQ9P2M7 1197 aaKnown RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 WRAP73Q9P2S5 460 aaPredicted RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 LUC7L2Q9Y383 392 aaKnown RBP10.3□□□□□ -0.76
SMC1A-205ENST00000469129 IGSF9BQ9UPX0 1349 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 RSPH10B2B2RC85 870 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 K7ENM7 598 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 USO1O60763 962 aaKnown RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 CCNE2O96020 404 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 RSPH10BP0C881 870 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 MYBP10242 640 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 EPB41P11171 864 aaKnown RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ERCC3P19447 782 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 EDNRBP24530 442 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ADKP55263 362 aaKnown RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 MOGSQ13724 837 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 NEDD9Q14511 834 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 SYCP1Q15431 976 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 PTPN14Q15678 1187 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 MIIPQ5JXC2 388 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 CYP26C1Q6V0L0 522 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 FRMD5Q7Z6J6 570 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 TMTC1Q8IUR5 882 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 GLIS3Q8NEA6 775 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 C16orf45Q96MC5 204 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 MMP19Q99542 508 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 TMEM206Q9H813 350 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ZNF408Q9H9D4 720 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 GBA2Q9HCG7 927 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ZNHIT6Q9NWK9 470 aaKnown RBP10.29□□□□□ -0.76
SMC1A-205ENST00000469129 KCNG1Q9UIX4 513 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 CAPN11Q9UMQ6 739 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ASTN1O14525 1302 aa10.29□□□□□ -0.76
SMC1A-205ENST00000469129 ZMYM2Q9UBW7 1377 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 H0YCG3 227 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ATP9AO75110 1047 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 RGS20O76081 388 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 PRPF6O94906 941 aaKnown RBP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 NR3C1P04150 777 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 CCDC175P0C221 793 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 SUPT20HL2P0C7V6 817 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 TGFB3P10600 412 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 PLS3P13797 630 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 TNNT1P13805 278 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 SCP2P22307 547 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 KRT9P35527 623 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 CASP5P51878 434 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ACTR2P61160 394 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ERVK-9P63128 1117 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ERVK-24P63145 666 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ZBED6P86452 979 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ADAM9Q13443 819 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 MYBPC2Q14324 1141 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 PTPN21Q16825 1174 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 XKR9Q5GH70 373 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 E4F1Q66K89 784 aaPredicted RBP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 GPAT2Q6NUI2 795 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ANKRD23Q86SG2 305 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 TRIM59Q8IWR1 403 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 DNAJC5GQ8N7S2 189 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 SMCR8Q8TEV9 937 aaPredicted RBP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 CPLX3Q8WVH0 158 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 PPP1R13BQ96KQ4 1090 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 DNAJC7Q99615 494 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms