RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CMA1	P23946	247 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	MARK3	P27448	753 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	DEFB103A	P81534	67 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	CEBPZ	Q03701	1054 aa	Known RBP	13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	GRIK4	Q16099	956 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	INF2	Q27J81	1249 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	EARS2	Q5JPH6	523 aa	Known RBP	13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	MARCH8	Q5T0T0	291 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	CCDC73	Q6ZRK6	1079 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	PLPPR4	Q7Z2D5	763 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	PLA2G4D	Q86XP0	818 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	AZI2	Q9H6S1	392 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	PCDHA7	Q9UN72	937 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	GBF1	Q92538	1859 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	CDH23	Q9H251	3354 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	IGKV6D-21	A0A0A0MT36	114 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	RRN3P2	A6NIE6	340 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	TBX3	O15119	743 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	DHX15	O43143	795 aa	Known RBP	13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	TLL1	O43897	1013 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	ARHGEF15	O94989	841 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	GJB5	O95377	273 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	CCNE2	O96020	404 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	CYP3A7	P24462	503 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	CIITA	P33076	1130 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	STAT5B	P51692	787 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	TAP1	Q03518	808 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	PTGDR	Q13258	359 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	NBR1	Q14596	966 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	RUFY4	Q6ZNE9	571 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	USP38	Q8NB14	1042 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	RASGRP4	Q8TDF6	673 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	SEPT8	Q92599	483 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	CCDC34	Q96HJ3	373 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	OSBPL7	Q9BZF2	842 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	RAB34	Q9BZG1	259 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	DDX19A	Q9NUU7	478 aa	Known RBP	13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	TUBE1	Q9UJT0	475 aa		13.53	□□□□□ -0.24
CTNS-205	ENST00000467663	FAM237A	A0A1B0GTK4	181 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	RBAK-RBAKDN	I3L0D1	243 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	IPO5	O00410	1097 aa	Known RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	DLL1	O00548	723 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	NEMF	O60524	1076 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	CHRNA1	P02708	482 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	RPLP2	P05387	115 aa	Known RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	CTSH	P09668	335 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	INSRR	P14616	1297 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	POU3F3	P20264	500 aa	Predicted RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	LONP1	P36776	959 aa	Known RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	SLC26A2	P50443	739 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	SET	Q01105	290 aa	Predicted RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	PLCB4	Q15147	1175 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	ZNF174	Q15697	407 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	LETM2	Q2VYF4	491 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	ABHD15	Q6UXT9	468 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	MRPS27	Q92552	414 aa	Known RBP	13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	CHAMP1	Q96JM3	812 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	AK8	Q96MA6	479 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	MBOAT7	Q96N66	472 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	RAD9A	Q99638	391 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	ZBED2	Q9BTP6	218 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM13B	Q9NYF5	915 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	STK24	Q9Y6E0	443 aa		13.52	□□□□□ -0.25
CTNS-205	ENST00000467663	LCHN	A4D1U4	455 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM205C	A6NFA0	338 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	SLC26A4	O43511	780 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	EDIL3	O43854	480 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	CCNT1	O60563	726 aa	Known RBP	13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	GADD45B	O75293	160 aa	Predicted RBP	13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	AMH	P03971	560 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	OR52Z1	P0C646	297 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	ATP2B1	P20020	1258 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	IGFBP4	P22692	258 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	MCM7	P33993	719 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM160A1	Q05DH4	1040 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	MGAT3	Q09327	533 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	DTHD1	Q6ZMT9	781 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	RSPH3	Q86UC2	560 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	SLFN12	Q8IYM2	578 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	GPT2	Q8TD30	523 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	APBB2	Q92870	758 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	ZNF577	Q9BSK1	485 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	TBC1D22B	Q9NU19	505 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	USP25	Q9UHP3	1055 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	FBXO2	Q9UK22	296 aa	Predicted RBP	13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	TRPC6	Q9Y210	931 aa		13.51	□□□□□ -0.25
CTNS-205	ENST00000467663	EPOP	A6NHQ4	379 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	DDX39A	O00148	427 aa	Known RBP	13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	MARCKS	P29966	332 aa	Predicted RBP	13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	TXLNA	P40222	546 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	IGBP1	P78318	339 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	PDIA5	Q14554	519 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	TMEM266	Q2M3C6	531 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663		Q4G0T1	1027 aa		13.5	□□□□□ -0.25
CTNS-205	ENST00000467663	FAM160B1	Q5W0V3	765 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms