RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 TRPV1Q8NER1 839 aa14.44□□□□□ -0.1
COL4A1-202ENST00000467182 ENOX1Q8TC92 643 aaKnown RBP14.44□□□□□ -0.1
COL4A1-202ENST00000467182 TRIB2Q92519 343 aa14.44□□□□□ -0.1
COL4A1-202ENST00000467182 CCDC47Q96A33 483 aaKnown RBP14.44□□□□□ -0.1
COL4A1-202ENST00000467182 FIZ1Q96SL8 496 aa14.44□□□□□ -0.1
COL4A1-202ENST00000467182 NIFKQ9BYG3 293 aaKnown RBP14.44□□□□□ -0.1
COL4A1-202ENST00000467182 GTPBP4Q9BZE4 634 aaKnown RBP14.44□□□□□ -0.1
COL4A1-202ENST00000467182 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
COL4A1-202ENST00000467182 SLC39A2Q9NP94 309 aa14.44□□□□□ -0.1
COL4A1-202ENST00000467182 MYH11P35749 1972 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 NKRFO15226 690 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL4A1-202ENST00000467182 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
COL4A1-202ENST00000467182 STAT5BP51692 787 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 MYL5Q02045 173 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 TARBP2Q15633 366 aaKnown RBP14.43□□□□□ -0.1
COL4A1-202ENST00000467182 XKR9Q5GH70 373 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 FAM26FQ5R3K3 315 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 FAM160B1Q5W0V3 765 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 EPM2AIP1Q7L775 607 aaPredicted RBP14.43□□□□□ -0.1
COL4A1-202ENST00000467182 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 SFR1Q86XK3 245 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 TRMT44Q8IYL2 757 aaKnown RBP14.43□□□□□ -0.1
COL4A1-202ENST00000467182 PPTC7Q8NI37 304 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 CD99L2Q8TCZ2 262 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 SAGE1Q9NXZ1 904 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 ODF2LQ9ULJ1 636 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 MAPK8IP1Q9UQF2 711 aa14.43□□□□□ -0.1
COL4A1-202ENST00000467182 SMTNL1A8MU46 457 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 NOP56O00567 594 aaKnown RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 USO1O60763 962 aaKnown RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 HIP1RO75146 1068 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 CYBAP13498 195 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 PMS1P54277 932 aaKnown RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 HERC4Q5GLZ8 1057 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 KLHL10Q6JEL2 608 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 OTUD6AQ7L8S5 288 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 TRIM50Q86XT4 487 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 GUF1Q8N442 669 aaKnown RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 AFG1LQ8WV93 481 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 NELFBQ8WX92 580 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 CEP170P1Q96L14 293 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 XPNPEP1Q9NQW7 623 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 CYP26B1Q9NR63 512 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 SEPT9Q9UHD8 586 aaPredicted RBP14.42□□□□□ -0.1
COL4A1-202ENST00000467182 NRBP1Q9UHY1 535 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 CTNND2Q9UQB3 1225 aa14.42□□□□□ -0.1
COL4A1-202ENST00000467182 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 SFI1A8K8P3 1242 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 ZBTB42B2RXF5 422 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TBCAO75347 108 aaKnown RBP14.41□□□□□ -0.1
COL4A1-202ENST00000467182 LGALS2P05162 132 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 MMP3P08254 477 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 GAP43P17677 238 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 CASP5P51878 434 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 STX17P56962 302 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TRIM32Q13049 653 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 PAK1Q13153 545 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 KIF22Q14807 665 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 LRRC41Q15345 812 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TRMT1LQ7Z2T5 733 aaKnown RBP14.41□□□□□ -0.1
COL4A1-202ENST00000467182 OR6J1Q8NGC5 347 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 LENG1Q96BZ8 264 aaPredicted RBP14.41□□□□□ -0.1
COL4A1-202ENST00000467182 DHTKD1Q96HY7 919 aaPredicted RBP14.41□□□□□ -0.1
COL4A1-202ENST00000467182 C16orf70Q9BSU1 422 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 OLFML3Q9NRN5 406 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
COL4A1-202ENST00000467182 TRIM49BA6NDI0 452 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 BECN2A8MW95 431 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 FAM13AO94988 1023 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 ZNF18P17022 549 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 CCNE1P24864 410 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 HOXD13P35453 343 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 DEKP35659 375 aaKnown RBP14.4□□□□□ -0.1
COL4A1-202ENST00000467182 PPP1R2P41236 205 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 MTERF2Q49AM1 385 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 SPATA1Q5VX52 437 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 TTI2Q6NXR4 508 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 ATP8B4Q8TF62 1192 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
COL4A1-202ENST00000467182 P2RX5Q93086 422 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 FAM167AQ96KS9 214 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 DUSP9Q99956 384 aaKnown RBP14.4□□□□□ -0.1
COL4A1-202ENST00000467182 STRA6Q9BX79 667 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
COL4A1-202ENST00000467182 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 PARVGQ9HBI0 331 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 GPRC5CQ9NQ84 441 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 FANCLQ9NW38 375 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 SEL1LQ9UBV2 794 aa14.4□□□□□ -0.1
COL4A1-202ENST00000467182 A6NJR5 290 aa14.39□□□□□ -0.11
COL4A1-202ENST00000467182 GOLGA6L19H0YKK7 550 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms