RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 KCNH3Q9ULD8 1083 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 DNM3Q9UQ16 869 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 MBLAC1A4D2B0 266 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-205ENST00000466897 INSRRP14616 1297 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 PFKFB1P16118 471 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 PPFIA1Q13136 1202 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 GRIK4Q16099 956 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 E2F4Q16254 413 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 RRAGBQ5VZM2 374 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 SLC39A5Q6ZMH5 540 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 PAWRQ96IZ0 340 aaKnown RBP16.95■□□□□ 0.3
NPHP4-205ENST00000466897 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-205ENST00000466897 MAGEF1Q9HAY2 307 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 CYP26B1Q9NR63 512 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 HDAC6Q9UBN7 1215 aa16.95■□□□□ 0.3
NPHP4-205ENST00000466897 A0A087X0B3 334 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 DDX11L8A8MPP1 907 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
NPHP4-205ENST00000466897 RFC5P40937 340 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 NAALADL2Q58DX5 795 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 ANKRD33Q7Z3H0 272 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 KCNK18Q7Z418 384 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 FSIP1Q8NA03 581 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 LMBR1Q8WVP7 490 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 CEP170P1Q96L14 293 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 JPH2Q9BR39 696 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-205ENST00000466897 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
NPHP4-205ENST00000466897 A0A1B0GVL5 298 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 C17orf102A2RUQ5 167 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 E9PMD0 336 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 MAGEB2O15479 319 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 DGAT1O75907 488 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 RPLP2P05387 115 aaKnown RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 STAT6P42226 847 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 SYKP43405 635 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 NDUFA8P51970 172 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 PLA2G4FQ68DD2 849 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 PIGOQ8TEQ8 1089 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 LRRC15Q8TF66 581 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 LARP4BQ92615 738 aaKnown RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 RAD54LQ92698 747 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 BHMT2Q9H2M3 363 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 GOLPH3LQ9H4A5 285 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
NPHP4-205ENST00000466897 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
NPHP4-205ENST00000466897 IGKV6-21A0A0C4DH24 114 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 TMEM150BA6NC51 233 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 ZBTB39O15060 712 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 POLR2DO15514 142 aaKnown RBP16.92■□□□□ 0.3
NPHP4-205ENST00000466897 C22orf31O95567 290 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 SLC12A3P55017 1021 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 SOX10P56693 466 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 FAM160A1Q05DH4 1040 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 MTERF2Q49AM1 385 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 XKR9Q5GH70 373 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 GDF6Q6KF10 455 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-205ENST00000466897 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 FMR1NBQ8N0W7 255 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-205ENST00000466897 ENGASEQ8NFI3 743 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 CCDC43Q96MW1 224 aaKnown RBP16.92■□□□□ 0.3
NPHP4-205ENST00000466897 TIPINQ9BVW5 301 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 PDLIM7Q9NR12 457 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 SETD4Q9NVD3 440 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 TUBE1Q9UJT0 475 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
NPHP4-205ENST00000466897 GADD45BO75293 160 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-205ENST00000466897 MAFO75444 373 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-205ENST00000466897 CD4P01730 458 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 NPEPPSP55786 919 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 HIC1Q14526 733 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 TAF2Q6P1X5 1199 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 MTHFD1LQ6UB35 978 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 LINC01465Q8N7H1 131 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 PDILTQ8N807 584 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 SLC7A3Q8WY07 619 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 PLIN2Q99541 437 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 KBTBD4Q9NVX7 518 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 SIP14410 1827 aa16.91■□□□□ 0.3
NPHP4-205ENST00000466897 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
NPHP4-205ENST00000466897 CYP11B2P19099 503 aa16.9■□□□□ 0.3
NPHP4-205ENST00000466897 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
NPHP4-205ENST00000466897 KLRC1P26715 233 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms