RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 GIMAP8Q8ND71 665 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 MORC4Q8TE76 937 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 CLEC4DQ8WXI8 215 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 PHKBQ93100 1093 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 RIPOR3Q96MK2 946 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 RMDN3Q96TC7 470 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 C17orf80Q9BSJ5 609 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 CPVLQ9H3G5 476 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 NCOA5Q9HCD5 579 aaKnown RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 ORC3Q9UBD5 711 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 TANC1Q9C0D5 1861 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 SMCO2A6NFE2 343 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 RBAK-RBAKDNI3L0D1 243 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 PPP1R11O60927 126 aaPredicted RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 EIF3JO75822 258 aaKnown RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 BAIAP3O94812 1187 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 IQCF3P0C7M6 154 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 CYP2C9P11712 490 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 EDNRBP24530 442 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 RFC2P35250 354 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 NLRP5P59047 1200 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 WDR5P61964 334 aaKnown RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 SETQ01105 290 aaPredicted RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 ORC2Q13416 577 aaPredicted RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 ACVR2BQ13705 512 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 TCTN1Q2MV58 587 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 CCDC144BQ3MJ40 725 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 MUM1L1Q5H9M0 696 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 ARMCX2Q7L311 632 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 KRT25Q7Z3Z0 450 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 RAB11FIP4Q86YS3 637 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 NSUN7Q8NE18 718 aaKnown RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 SCFD2Q8WU76 684 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 TMX3Q96JJ7 454 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 FGD4Q96M96 766 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 RAD9AQ99638 391 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 PXMP2Q9NR77 195 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 CLDND1Q9NY35 253 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
CLDN4-204ENST00000466411 UNC79Q9P2D8 2635 aa7.88□□□□□ -1.15
CLDN4-204ENST00000466411 MEIS2O14770 477 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 TBX10O75333 385 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 CABYRO75952 493 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 EYA4O95677 639 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 GCFC2P16383 781 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SNAP25P60880 206 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SMAD4Q13485 552 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 CUL4AQ13619 759 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 TIGD5Q53EQ6 642 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 IQSEC1Q6DN90 963 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 MOXD1Q6UVY6 613 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SLC30A10Q6XR72 485 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 NOL8Q76FK4 1167 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 NIPA1Q7RTP0 329 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 NLRX1Q86UT6 975 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 CCDC83Q8IWF9 413 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 KIAA2013Q8IYS2 634 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 CMTR1Q8N1G2 835 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 PIBF1Q8WXW3 757 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 C8orf76Q96K31 380 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 MSLNLQ96KJ4 702 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 ALG1Q9BT22 464 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 TRMT13Q9NUP7 481 aaKnown RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.87□□□□□ -1.15
CLDN4-204ENST00000466411 TCEAL9Q9UHQ7 104 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SMC3Q9UQE7 1217 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 Q9Y3F1 56 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SPEGQ15772 3267 aa7.87□□□□□ -1.15
CLDN4-204ENST00000466411 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 CCDC194A0A1B0GVG4 234 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.86□□□□□ -1.15
CLDN4-204ENST00000466411 H3BNC9 293 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 H3BQV1 296 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 OPLAHO14841 1288 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 ZEB2O60315 1214 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 NR3C2P08235 984 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 ARP10275 920 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 PTGS1P23219 599 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 KRT2P35908 639 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 SREBF1P36956 1147 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
CLDN4-204ENST00000466411 CPT1AP50416 773 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 USP11P51784 963 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 PSMC6P62333 389 aa7.86□□□□□ -1.15
CLDN4-204ENST00000466411 HYAL1Q12794 435 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms