RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 PLCB4Q15147 1175 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 FAM43BQ6ZT52 329 aaPredicted RBP16.58■□□□□ 0.24
CXCR4-203ENST00000466288 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.24
CXCR4-203ENST00000466288 ADAM2Q99965 735 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 TCF25Q9BQ70 676 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 SMOC2Q9H3U7 446 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
CXCR4-203ENST00000466288 FAM186AA6NE01 2351 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 C2CD4DB7Z1M9 353 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 TRDNQ13061 729 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 MTHFD1LQ6UB35 978 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 SLC24A5Q71RS6 500 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 FRMD5Q7Z6J6 570 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
CXCR4-203ENST00000466288 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 POMKQ9H5K3 350 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 JPH1Q9HDC5 661 aaPredicted RBP16.57■□□□□ 0.24
CXCR4-203ENST00000466288 C1orf112Q9NSG2 853 aa16.57■□□□□ 0.24
CXCR4-203ENST00000466288 MAFGO15525 162 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 LAG3P18627 525 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 ID4P47928 161 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 FAM189BP81408 668 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 WTAPQ15007 396 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 ASTLQ6HA08 431 aaPredicted RBP16.56■□□□□ 0.24
CXCR4-203ENST00000466288 PLPPR4Q7Z2D5 763 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 TMEM40Q8WWA1 233 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 NKD2Q969F2 451 aaPredicted RBP16.56■□□□□ 0.24
CXCR4-203ENST00000466288 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 NGRNQ9NPE2 291 aaKnown RBP16.56■□□□□ 0.24
CXCR4-203ENST00000466288 ENTPD7Q9NQZ7 604 aa16.56■□□□□ 0.24
CXCR4-203ENST00000466288 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
CXCR4-203ENST00000466288 ERICH2A1L162 156 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 DENND3A2RUS2 1198 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 RPS6KA5O75582 802 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 FGFR1P11362 822 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 PDE4AP27815 886 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 LRRC55Q6ZSA7 311 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 ADSSL1Q8N142 457 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 CASP10Q92851 521 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
CXCR4-203ENST00000466288 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 ADAM7Q9H2U9 754 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 TMEM161AQ9NX61 479 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 SLC9A2Q9UBY0 812 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 ST3GAL5Q9UNP4 418 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 GINS2Q9Y248 185 aa16.55■□□□□ 0.24
CXCR4-203ENST00000466288 CYP21A2P08686 494 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 STAT5BP51692 787 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 CLCN5P51795 746 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 ACTR2P61160 394 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 KIAA0319LQ8IZA0 1049 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 HCFC2Q9Y5Z7 792 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 GVINP1Q7Z2Y8 2422 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 ASGR2P07307 311 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 KLRC1P26715 233 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 SMARCA1P28370 1054 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 ITIH3Q06033 890 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 UBE2SQ16763 222 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 CES5AQ6NT32 575 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 KCNT2Q6UVM3 1135 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 MAP3K14Q99558 947 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 ELAC1Q9H777 363 aaKnown RBP16.54■□□□□ 0.24
CXCR4-203ENST00000466288 KCNH7Q9NS40 1196 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
CXCR4-203ENST00000466288 CACNA1AO00555 2505 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 FNDC1Q4ZHG4 1894 aaPredicted RBP16.53■□□□□ 0.24
CXCR4-203ENST00000466288 GPR182O15218 404 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 PBX3P40426 434 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
CXCR4-203ENST00000466288 TMC7Q7Z402 723 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 FAM228AQ86W67 206 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 CASD1Q96PB1 797 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
CXCR4-203ENST00000466288 PCDHA6Q9UN73 950 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 PCDHA8Q9Y5H6 950 aa16.53■□□□□ 0.24
CXCR4-203ENST00000466288 NFASCO94856 1347 aa16.52■□□□□ 0.24
CXCR4-203ENST00000466288 C2orf71A6NGG8 1288 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 ATG7O95352 703 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 ANTXR2P58335 489 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 DSC3Q14574 896 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 ODR4Q5SWX8 454 aa16.52■□□□□ 0.23
CXCR4-203ENST00000466288 CWF19L1Q69YN2 538 aaKnown RBP16.52■□□□□ 0.23
CXCR4-203ENST00000466288 SRBD1Q8N5C6 995 aaKnown RBP16.52■□□□□ 0.23
CXCR4-203ENST00000466288 MRPL43Q8N983 215 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms