RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 LARP4Q71RC2 724 aaKnown RBP eCLIP3.62□□□□□ -1.83
CCDC93-205ENST00000466171 C16orf59Q7L2K0 433 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF575Q86XF7 245 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 PTRH1Q86Y79 214 aaKnown RBP3.62□□□□□ -1.83
CCDC93-205ENST00000466171 MCF2L2Q86YR7 1114 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 SCUBE1Q8IWY4 988 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 SHCBP1Q8NEM2 672 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 CALML6Q8TD86 181 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 ZG16BQ96DA0 208 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 MPHOSPH9Q99550 1183 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 TRIM55Q9BYV6 548 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 MMRN2Q9H8L6 949 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 CDC42EP3Q9UKI2 254 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 TRAF6Q9Y4K3 522 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 ASXL2Q76L83 1435 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 UNCXA6NJT0 531 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 MAN2B1O00754 1011 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 SLC26A4O43511 780 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 RAMP2O60895 175 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 PEX11BO96011 259 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 PYGMP11217 842 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 PDE6AP16499 860 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 NANOS3P60323 173 aaKnown RBP3.61□□□□□ -1.83
CCDC93-205ENST00000466171 SUMO1P63165 101 aaKnown RBP3.61□□□□□ -1.83
CCDC93-205ENST00000466171 CD83Q01151 205 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 MAP3K12Q12852 859 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 TMEM200BQ69YZ2 307 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 TRIM68Q6AZZ1 485 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 GRAMD4Q6IC98 578 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF662Q6ZS27 426 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 OSTM1Q86WC4 334 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 TMPRSS6Q8IU80 811 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 ANKRD35Q8N283 1001 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 OR14K1Q8NGZ2 314 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 CFHR4Q92496 578 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 CRAMP1Q96RY5 1269 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 SPATA9Q9BWV2 254 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 OR10A5Q9H207 317 aa3.61□□□□□ -1.83
CCDC93-205ENST00000466171 TRBV23-1A0A0A0MS06 115 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 TMEM191CA6NGB0 347 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 SRGAP2CP0DJJ0 459 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 TCF3P15923 654 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 MC4RP32245 332 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 SESN2P58004 480 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-205ENST00000466171 MOGSQ13724 837 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 YOD1Q5VVQ6 348 aaPredicted RBP3.6□□□□□ -1.83
CCDC93-205ENST00000466171 ZC3H7AQ8IWR0 971 aaKnown RBP3.6□□□□□ -1.83
CCDC93-205ENST00000466171 HIPK4Q8NE63 616 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 PCDH19Q8TAB3 1148 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 LARP4BQ92615 738 aaKnown RBP3.6□□□□□ -1.83
CCDC93-205ENST00000466171 LPPQ93052 612 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 CLIP3Q96DZ5 547 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 TMEM176AQ96HP8 235 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 UCKL1Q9NWZ5 548 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 BTBD7Q9P203 1132 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 PCDHA8Q9Y5H6 950 aa3.6□□□□□ -1.83
CCDC93-205ENST00000466171 A0A1W2PRX2 142 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 ARVCFO00192 962 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 KLF4O43474 513 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 C4BPAP04003 597 aaKnown RBP3.59□□□□□ -1.83
CCDC93-205ENST00000466171 AMY2AP04746 511 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 AMY2BP19961 511 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 DNM2P50570 870 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 JAM2P57087 298 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 GABREP78334 506 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 CNGB1Q14028 1251 aaPredicted RBP3.59□□□□□ -1.83
CCDC93-205ENST00000466171 RAB33AQ14088 237 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 FNDC7Q5VTL7 733 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 KANK2Q63ZY3 851 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 LDLRAD3Q86YD5 345 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 GPR135Q8IZ08 494 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 SLC43A3Q8NBI5 491 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 TINF2Q9BSI4 451 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 CBLCQ9ULV8 474 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 VWA7Q9Y334 891 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 ASB1Q9Y576 335 aa3.59□□□□□ -1.83
CCDC93-205ENST00000466171 CCDC66A2RUB6 948 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 HIP1RO75146 1068 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 H2AFYO75367 372 aaKnown RBP3.58□□□□□ -1.84
CCDC93-205ENST00000466171 MPIG6BO95866 241 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 APEX1P27695 318 aaKnown RBP3.58□□□□□ -1.84
CCDC93-205ENST00000466171 PTGS2P35354 604 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 STAT5BP51692 787 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 LACTBP83111 547 aaPredicted RBP3.58□□□□□ -1.84
CCDC93-205ENST00000466171 HGFACQ04756 655 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 RIN1Q13671 783 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 RRP1BQ14684 758 aaKnown RBP3.58□□□□□ -1.84
CCDC93-205ENST00000466171 KLHDC10Q6PID8 442 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 CKAP2LQ8IYA6 745 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 GSPT2Q8IYD1 628 aaKnown RBP3.58□□□□□ -1.84
CCDC93-205ENST00000466171 ULK2Q8IYT8 1036 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 RABGGTAQ92696 567 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 MIEF2Q96C03 454 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 GBP4Q96PP9 640 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 AMNQ9BXJ7 453 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 SLC2A4RGQ9NR83 387 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 KCNH7Q9NS40 1196 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 CEP72Q9P209 647 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 DMRT1Q9Y5R6 373 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms