RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 RSPH10BP0C881 870 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 ATP2B1P20020 1258 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 MCM7P33993 719 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 THPOP40225 353 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
RBBP4-209ENST00000465780 TOB1P50616 345 aaPredicted RBP11.97□□□□□ -0.49
RBBP4-209ENST00000465780 PRKCEQ02156 737 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 XKR3Q5GH77 459 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 MTHFD1LQ6UB35 978 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 NME8Q8N427 588 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 HERVK_113Q902F9 699 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 VWCEQ96DN2 955 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.497e-7■■□□□ 13.4
RBBP4-209ENST00000465780 NIFKQ9BYG3 293 aaKnown RBP11.97□□□□□ -0.49
RBBP4-209ENST00000465780 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
RBBP4-209ENST00000465780 TMEM60Q9H2L4 133 aa11.97□□□□□ -0.49
RBBP4-209ENST00000465780 TTC12Q9H892 705 aaPredicted RBP11.97□□□□□ -0.49
RBBP4-209ENST00000465780 LOXHD1Q8IVV2 1947 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 LAD1O00515 517 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 ACTN1P12814 892 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.49
RBBP4-209ENST00000465780 KLRC1P26715 233 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 TXKP42681 527 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 IGBP1P78318 339 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 ZNF174Q15697 407 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 UGCGQ16739 394 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 NCAPH2Q6IBW4 605 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 RUFY4Q6ZNE9 571 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 ZNF365Q70YC5 407 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 BRAPQ7Z569 592 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 RNPC3Q96LT9 517 aaKnown RBP11.96□□□□□ -0.49
RBBP4-209ENST00000465780 PPME1Q9Y570 386 aa11.96□□□□□ -0.49
RBBP4-209ENST00000465780 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 HAX1O00165 279 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 NBNO60934 754 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 BAIAP3O94812 1187 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 STBD1O95210 358 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 LYPLA2O95372 231 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 C22orf31O95567 290 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 ACRP10323 421 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 SYT1P21579 422 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 PRPHP41219 470 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 GPNMBQ14956 572 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 TARBP2Q15633 366 aaKnown RBP11.95□□□□□ -0.5
RBBP4-209ENST00000465780 TMEM266Q2M3C6 531 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 IER5Q5VY09 327 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
RBBP4-209ENST00000465780 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 C4orf19Q8IY42 314 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 C4orf32Q8N8J7 132 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 HSD17B14Q9BPX1 270 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 ZSWIM4Q9H7M6 989 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.95□□□□□ -0.5
RBBP4-209ENST00000465780 PCDHB6Q9Y5E3 794 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 SQORQ9Y6N5 450 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 SIP14410 1827 aa11.95□□□□□ -0.5
RBBP4-209ENST00000465780 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 EFCAB14O75071 495 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 BMP15O95972 392 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 TMOD1P28289 359 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 MGAT3Q09327 533 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 PTGDRQ13258 359 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 PDIA5Q14554 519 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 MBTPS1Q14703 1052 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 CNKSR3Q6P9H4 555 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 LXNQ9BS40 222 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 RAB34Q9BZG1 259 aa11.94□□□□□ -0.5
RBBP4-209ENST00000465780 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-209ENST00000465780 ARID2Q68CP9 1835 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 ABHD14A-ACY1A0A1B0GW23 586 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 M0QZ92 97 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 SLITRK3O94933 977 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 CHRNA1P02708 482 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 CTSHP09668 335 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 MUTP22033 750 aa11.93□□□□□ -0.5
RBBP4-209ENST00000465780 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
RBBP4-209ENST00000465780 TBC1D8BQ0IIM8 1120 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms