RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 PCDHA5Q9Y5H7 936 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DKC1O60832 514 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTPRU-206ENST00000465525 CYP11B2P19099 503 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 RARRES1P49788 294 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 PLCB4Q15147 1175 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 MTERF2Q49AM1 385 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 ARSHQ5FYA8 562 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 XKR3Q5GH77 459 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DDX12PQ92771 950 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 CCDC34Q96HJ3 373 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DEFB118Q96PH6 123 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 C16orf70Q9BSU1 422 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 TRIM9Q9C026 710 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 KIAA1468Q9P260 1216 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DBR1Q9UK59 544 aaKnown RBP19.17■□□□□ 0.66
PTPRU-206ENST00000465525 MYH11P35749 1972 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 ADAMTS4O75173 837 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 KRT18P05783 430 aaKnown RBP19.16■□□□□ 0.66
PTPRU-206ENST00000465525 ASIC1P78348 528 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 GNASQ5JWF2 1037 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 PADI6Q6TGC4 694 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 RBM43Q6ZSC3 357 aaKnown RBP19.16■□□□□ 0.66
PTPRU-206ENST00000465525 PLPPR4Q7Z2D5 763 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 RNF180Q86T96 592 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 CEP170P1Q96L14 293 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 RNPEPQ9H4A4 650 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
PTPRU-206ENST00000465525 USO1O60763 962 aaKnown RBP19.15■□□□□ 0.66
PTPRU-206ENST00000465525 GJB1P08034 283 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 HOXD8P13378 290 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-206ENST00000465525 AMPD3Q01432 767 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 MAEAQ7L5Y9 396 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 OTUD6AQ7L8S5 288 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 ELOA2Q8IYF1 753 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-206ENST00000465525 ARRDC4Q8NCT1 418 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 KLHDC9Q8NEP7 349 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 SMARCE1Q969G3 411 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 C7orf25Q9BPX7 421 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 ERAP1Q9NZ08 941 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 TRPC6Q9Y210 931 aa19.15■□□□□ 0.66
PTPRU-206ENST00000465525 H3BRB1 525 aa19.14■□□□□ 0.66
PTPRU-206ENST00000465525 ZEB2O60315 1214 aa19.14■□□□□ 0.66
PTPRU-206ENST00000465525 KPNA6O60684 536 aa19.14■□□□□ 0.66
PTPRU-206ENST00000465525 CST5P28325 142 aaPredicted RBP19.14■□□□□ 0.66
PTPRU-206ENST00000465525 KCTD17Q8N5Z5 321 aa19.14■□□□□ 0.66
PTPRU-206ENST00000465525 TRAPPC12Q8WVT3 735 aa19.14■□□□□ 0.66
PTPRU-206ENST00000465525 TUT1Q9H6E5 874 aaKnown RBP19.14■□□□□ 0.66
PTPRU-206ENST00000465525 RSPH10B2B2RC85 870 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 SMC2O95347 1197 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 SGPL1O95470 568 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 RPN1P04843 607 aaKnown RBP19.14■□□□□ 0.65
PTPRU-206ENST00000465525 RSPH10BP0C881 870 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 XRCC6P12956 609 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTPRU-206ENST00000465525 IDEP14735 1019 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 C1orf186Q6ZWK4 172 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 PCSK9Q8NBP7 692 aaKnown RBP19.14■□□□□ 0.65
PTPRU-206ENST00000465525 ATP8B4Q8TF62 1192 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 DNAJC19Q96DA6 116 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 REEP2Q9BRK0 252 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 TMEM106CQ9BVX2 250 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 CYP26B1Q9NR63 512 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 NRBP2Q9NSY0 501 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 MAN1B1Q9UKM7 699 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 OGDHLQ9ULD0 1010 aa19.14■□□□□ 0.65
PTPRU-206ENST00000465525 KAT6AQ92794 2004 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 KLRC4O43908 158 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 LETM1O95202 739 aaPredicted RBP19.13■□□□□ 0.65
PTPRU-206ENST00000465525 GIT2Q14161 759 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 LRRC41Q15345 812 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 KAT2BQ92831 832 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 HPS3Q969F9 1004 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 ZBTB10Q96DT7 871 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 FAM167AQ96KS9 214 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 LRRC27Q9C0I9 530 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 ZHX3Q9H4I2 956 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 TUBE1Q9UJT0 475 aa19.13■□□□□ 0.65
PTPRU-206ENST00000465525 ZNF215Q9UL58 517 aaPredicted RBP19.13■□□□□ 0.65
PTPRU-206ENST00000465525 SFI1A8K8P3 1242 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 CAPN2P17655 700 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 SARSP49591 514 aaKnown RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 SOX10P56693 466 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 IGBP1P78318 339 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 KCNA10Q16322 511 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 KMT5BQ4FZB7 885 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 CCSAPQ6IQ19 270 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 SASS6Q6UVJ0 657 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 CXCL17Q6UXB2 119 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 U2AF1L4Q8WU68 220 aaKnown RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 BBXQ8WY36 941 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 TSEN34Q9BSV6 310 aaKnown RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 NIFKQ9BYG3 293 aaKnown RBP19.12■□□□□ 0.65
PTPRU-206ENST00000465525 CRISPLD2Q9H0B8 497 aa19.12■□□□□ 0.65
PTPRU-206ENST00000465525 ZBTB42B2RXF5 422 aa19.11■□□□□ 0.65
PTPRU-206ENST00000465525 F2P00734 622 aa19.11■□□□□ 0.65
PTPRU-206ENST00000465525 TFRCP02786 760 aaKnown RBP19.11■□□□□ 0.65
PTPRU-206ENST00000465525 GJA8P48165 433 aa19.11■□□□□ 0.65
PTPRU-206ENST00000465525 SLC26A2P50443 739 aa19.11■□□□□ 0.65
PTPRU-206ENST00000465525 PURAQ00577 322 aaKnown RBP19.11■□□□□ 0.65
PTPRU-206ENST00000465525 SPATA20Q8TB22 786 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms