RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 NACC1Q96RE7 527 aa18.96■□□□□ 0.63
USP39-211ENST00000465282 JPH2Q9BR39 696 aaPredicted RBP18.96■□□□□ 0.63
USP39-211ENST00000465282 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
USP39-211ENST00000465282 ZDHHC9Q9Y397 364 aa18.96■□□□□ 0.63
USP39-211ENST00000465282 SRPRBQ9Y5M8 271 aaKnown RBP18.96■□□□□ 0.63
USP39-211ENST00000465282 TCHHQ07283 1943 aa18.96■□□□□ 0.63
USP39-211ENST00000465282 PPP6R2O75170 966 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 SYN1P17600 705 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 STK38Q15208 465 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 TRIM71Q2Q1W2 868 aaKnown RBP18.95■□□□□ 0.62
USP39-211ENST00000465282 TMEM199Q8N511 208 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 LINC00301Q8NCQ3 95 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 WRAP73Q9P2S5 460 aaPredicted RBP18.95■□□□□ 0.62
USP39-211ENST00000465282 KDM3AQ9Y4C1 1321 aa18.95■□□□□ 0.62
USP39-211ENST00000465282 CKBP12277 381 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 SELPP16109 830 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 TMOD1P28289 359 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 RFC2P35250 354 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 CCT6AP40227 531 aaKnown RBP18.94■□□□□ 0.62
USP39-211ENST00000465282 CEBPZQ03701 1054 aaKnown RBP18.94■□□□□ 0.62
USP39-211ENST00000465282 TBC1D8BQ0IIM8 1120 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 TRMT1LQ7Z2T5 733 aaKnown RBP18.94■□□□□ 0.62
USP39-211ENST00000465282 SNX29Q8TEQ0 813 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 TRAPPC12Q8WVT3 735 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 DHX38Q92620 1227 aaKnown RBP18.94■□□□□ 0.62
USP39-211ENST00000465282 FTOQ9C0B1 505 aaKnown RBP eCLIP18.94■□□□□ 0.62
USP39-211ENST00000465282 NT5C3AQ9H0P0 336 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 CYP26B1Q9NR63 512 aa18.94■□□□□ 0.62
USP39-211ENST00000465282 DBR1Q9UK59 544 aaKnown RBP18.94■□□□□ 0.62
USP39-211ENST00000465282 SPTLC2O15270 562 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 GAS2O43903 313 aaKnown RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 MED24O75448 989 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 C22orf31O95567 290 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 THPOP40225 353 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 RFC5P40937 340 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 CDC42EP1Q00587 391 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 MTERF2Q49AM1 385 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 HYIQ5T013 277 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 PRPF38BQ5VTL8 546 aaKnown RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 IER5Q5VY09 327 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 KRI1Q8N9T8 703 aaKnown RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 KCNG4Q8TDN1 519 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 CEP170P1Q96L14 293 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 CEP89Q96ST8 783 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
USP39-211ENST00000465282 TFIP11Q9UBB9 837 aaKnown RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 FBXO2Q9UK22 296 aaPredicted RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 RBM19Q9Y4C8 960 aaKnown RBP18.93■□□□□ 0.62
USP39-211ENST00000465282 MAFO75444 373 aaPredicted RBP18.92■□□□□ 0.62
USP39-211ENST00000465282 PFKMP08237 780 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 IQCF3P0C7M6 154 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 ITGB8P26012 769 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 MARCKSP29966 332 aaPredicted RBP18.92■□□□□ 0.62
USP39-211ENST00000465282 CYP2C18P33260 490 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 UBA7P41226 1012 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 DNM2P50570 870 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 KRT85P78386 507 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 PPIGQ13427 754 aaKnown RBP eCLIP18.92■□□□□ 0.626e-7■■■□□ 16
USP39-211ENST00000465282 XKR9Q5GH70 373 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 FAM26DQ5JW98 314 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 LRRC8DQ7L1W4 858 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 RPUSD2Q8IZ73 545 aaKnown RBP18.92■□□□□ 0.62
USP39-211ENST00000465282 SLC7A3Q8WY07 619 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 BADQ92934 168 aa18.92■□□□□ 0.62
USP39-211ENST00000465282 CCDC43Q96MW1 224 aaKnown RBP18.92■□□□□ 0.62
USP39-211ENST00000465282 IGKV6-21A0A0C4DH24 114 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 RSPH10B2B2RC85 870 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 RSPH10BP0C881 870 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 BMP8BP34820 402 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 DNM1Q05193 864 aaKnown RBP18.91■□□□□ 0.62
USP39-211ENST00000465282 FPGSQ05932 587 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 EFCAB12Q6NXP0 572 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 RUFY4Q6ZNE9 571 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 FAM43BQ6ZT52 329 aaPredicted RBP18.91■□□□□ 0.62
USP39-211ENST00000465282 METTL13Q8N6R0 699 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 ZNF579Q8NAF0 562 aaKnown RBP18.91■□□□□ 0.62
USP39-211ENST00000465282 DNAJB3Q8WWF6 145 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 WNT8BQ93098 351 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 CALML4Q96GE6 196 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 GDF15Q99988 308 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 MMTAG2Q9BU76 263 aaKnown RBP18.91■□□□□ 0.62
USP39-211ENST00000465282 CCSER1Q9C0I3 900 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 WNT8AQ9H1J5 351 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 DHX33Q9H6R0 707 aaKnown RBP18.91■□□□□ 0.62
USP39-211ENST00000465282 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 RCOR1Q9UKL0 485 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 KIAA1024Q9UPX6 916 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
USP39-211ENST00000465282 PP2D1A8MPX8 630 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 M0QZ92 97 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 DGAT1O75907 488 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 CDC25AP30304 524 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 TXLNAP40222 546 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 MAGEA10P43363 369 aaPredicted RBP18.9■□□□□ 0.62
USP39-211ENST00000465282 RARRES1P49788 294 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 POLGP54098 1239 aaPredicted RBP18.9■□□□□ 0.62
USP39-211ENST00000465282 NPEPPSP55786 919 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 ZNF618Q5T7W0 954 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 PLA2G4FQ68DD2 849 aa18.9■□□□□ 0.62
USP39-211ENST00000465282 POTEGQ6S5H5 508 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms