RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 STX8Q9UNK0 236 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 MYH7BA7E2Y1 1941 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 MYH4Q9Y623 1939 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 DDX60LQ5H9U9 1706 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 XIRP1Q702N8 1843 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 WNK3Q9BYP7 1800 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 CCDC169A6NNP5 214 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 OPLAHO14841 1288 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 CTNND1O60716 968 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 RTN2O75298 545 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 AFPP02771 609 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 SSBP05455 408 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP48-206ENST00000464577 GBP1P32455 592 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 DRG2P55039 364 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 JAM2P57087 298 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 GSTO1P78417 241 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 ECM1Q16610 540 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 CLEC4GQ6UXB4 293 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 C3orf67Q6ZVT6 689 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 COL23A1Q86Y22 540 aaPredicted RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 CCDC63Q8NA47 563 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NEK9Q8TD19 979 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 SCFD1Q8WVM8 642 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 RSRC1Q96IZ7 334 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 PIGSQ96S52 555 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NAP1L3Q99457 506 aaPredicted RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 TMEM109Q9BVC6 243 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 EPB41L4BQ9H329 900 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 PABPC3Q9H361 631 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 BATF3Q9NR55 127 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 ZDHHC18Q9NUE0 388 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP48-206ENST00000464577 HDAC9Q9UKV0 1011 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 AFF2P51816 1311 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 PITPNM2Q9BZ72 1349 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CCDC189A1A4V9 331 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 BACH1O14867 736 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CAND2O75155 1236 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 AGTP01019 485 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 MMEP08473 750 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ALADP13716 330 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CHN1P15882 459 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ADAM9Q13443 819 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DHX34Q14147 1143 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 E2F5Q15329 346 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SLC10A5Q5PT55 438 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DUPD1Q68J44 220 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 HIBCHQ6NVY1 386 aaPredicted RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 NELFCDQ8IXH7 590 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SH3RF3Q8TEJ3 882 aaPredicted RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 FAXDC2Q96IV6 333 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DCBLD2Q96PD2 775 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 MXD3Q9BW11 206 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 FGFBP2Q9BYJ0 223 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 NSRP1Q9H0G5 558 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 STMN4Q9H169 189 aaPredicted RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 ADAM7Q9H2U9 754 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CPVLQ9H3G5 476 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 GOLPH3Q9H4A6 298 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SAMD15Q9P1V8 674 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CNOT7Q9UIV1 285 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 AMFRQ9UKV5 643 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 PNMA2Q9UL42 364 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 TRAF3IP3Q9Y228 551 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 IRS2Q9Y4H2 1338 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 GOLGA6L10A0A0M3HER8 536 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 RGL2O15211 777 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SLC16A3O15427 465 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 DDX3YO15523 660 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 BAG3O95817 575 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 FERP16591 822 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 PON1P27169 355 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 GBP2P32456 591 aaPredicted RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 PMS2P54278 862 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DR1Q01658 176 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 KLRC3Q07444 240 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ZNF268Q14587 947 aaPredicted RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 EPHA7Q15375 998 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 PPP1R7Q15435 360 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 EXOC3L4Q17RC7 722 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DENND2CQ68D51 928 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 BTNL9Q6UXG8 535 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 C16orf86Q6ZW13 317 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SLC44A5Q8NCS7 719 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 MDM1Q8TC05 714 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CELF1Q92879 486 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 EYA3Q99504 573 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ERP44Q9BS26 406 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 CELF4Q9BZC1 486 aaKnown RBP7.93□□□□□ -1.14
USP48-206ENST00000464577 CARD9Q9H257 536 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 DPH5Q9H2P9 285 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 SIX2Q9NPC8 291 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ARMCX3Q9UH62 379 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms