RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 GJB7Q6PEY0 223 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 INTS13Q9NVM9 706 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 PRDM4Q9UKN5 801 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 HPCAL4Q9UM19 191 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 PREX1Q8TCU6 1659 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 SALL1Q9NSC2 1324 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 TTI1O43156 1089 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 ABL1P00519 1130 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MMEP08473 750 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MMP10P09238 476 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 ZNF18P17022 549 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 PIK3CAP42336 1068 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 PPP2R5EQ16537 467 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MTERF2Q49AM1 385 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MSANTD4Q8NCY6 345 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 CCDC110Q8TBZ0 833 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 SAAL1Q96ER3 474 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 CELF4Q9BZC1 486 aaKnown RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 KMT5AQ9NQR1 393 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 NXF1Q9UBU9 619 aaKnown RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 L1RE1Q9UN81 338 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 TECPR2O15040 1411 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 ZSCAN5CA6NGD5 496 aaPredicted RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 SGK1O00141 431 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 TXNDC9O14530 226 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 HIP1RO75146 1068 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MAN1A1P33908 653 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 PDE6BP35913 854 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 MFAP3P55082 362 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 IGBP1P78318 339 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 C10orf76Q5T2E6 689 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 LMBRD2Q68DH5 695 aaPredicted RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 CC2D2BQ6DHV5 1058 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 IWS1Q96ST2 819 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 RIOK1Q9BRS2 568 aaKnown RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 DHX36Q9H2U1 1008 aaKnown RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 AGLP35573 1532 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SYNJ2BP-COX16A0A087WUM0 186 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 HMGB1P1B2RPK0 211 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 SLC37A4O43826 429 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ERFP50548 548 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SEC23AQ15436 765 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SCARA5Q6ZMJ2 495 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 CROCCP2Q86T23 111 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 AZI2Q9H6S1 392 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ZNF408Q9H9D4 720 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 COX16Q9P0S2 106 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ANAPC7Q9UJX3 599 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ANAPC5Q9UJX4 755 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ODF2LQ9ULJ1 636 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 A0A087X0T9 212 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SLC16A4O15374 487 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SUN1O94901 812 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 FTLP02792 175 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 FAM228BP0C875 321 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 GAP43P17677 238 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 CRKP46108 304 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 PPP2R5CQ13362 524 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ZC2HC1CQ53FD0 456 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 SUPT20HQ8NEM7 779 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 MTMR4Q9NYA4 1195 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 MAGED2Q9UNF1 606 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 MAD1L1Q9Y6D9 718 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 IRAK1P51617 712 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 YWHAGP61981 247 aaKnown RBP eCLIP9.8□□□□□ -0.84
HPS4-208ENST00000464362 ICE2Q659A1 982 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 SRRM1Q8IYB3 904 aaKnown RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 ZNF512BQ96KM6 892 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 ZIM3Q96PE6 472 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 TAF1DQ9H5J8 278 aaPredicted RBP9.8□□□□□ -0.84
HPS4-208ENST00000464362 PDE4DIPQ5VU43 2346 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 FLT1P17948 1338 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 ITIH6Q6UXX5 1313 aa9.8□□□□□ -0.84
HPS4-208ENST00000464362 LRRD1A4D1F6 860 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 GOLGA8MH3BSY2 632 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 STAMBPO95630 424 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PSMC4P43686 418 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PROM2Q8N271 834 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 HDAC7Q8WUI4 952 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 FAM118BQ9BPY3 351 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 WDR11Q9BZH6 1224 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 ANKZF1Q9H8Y5 726 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 TMEM131LA2VDJ0 1609 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 ABCB11O95342 1321 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 H0Y3Z8 333 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 BAG2O95816 211 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 TFAMQ00059 246 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 LRRC8CQ8TDW0 803 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 C1orf54Q8WWF1 131 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms