RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 NFYCQ13952 458 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 NOLC1Q14978 699 aaKnown RBP eCLIP6.34□□□□□ -1.39
ITGB1-208ENST00000464001 SEC23AQ15436 765 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
ITGB1-208ENST00000464001 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 HIPK4Q8NE63 616 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 EDAQ92838 391 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 GBP4Q96PP9 640 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 Q9UFV3 132 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 PUF60Q9UHX1 559 aaKnown RBP6.34□□□□□ -1.39
ITGB1-208ENST00000464001 CDC42EP3Q9UKI2 254 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 ASB1Q9Y576 335 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 PRAMEF22A3QJZ6 481 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 CYR61O00622 381 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 KCNQ2O43526 872 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 HIP1RO75146 1068 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 MEOX1P50221 254 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
ITGB1-208ENST00000464001 AGBL4Q5VU57 503 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 KANK2Q63ZY3 851 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 LRSAM1Q6UWE0 723 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 OVCH1Q7RTY7 1134 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 POLNQ7Z5Q5 900 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 Q8N1X5 172 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 CALML6Q8TD86 181 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 ASB15Q8WXK1 588 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 DLG3Q92796 817 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 SCLYQ96I15 445 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 SORCS2Q96PQ0 1159 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 DPYSL5Q9BPU6 564 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 B3GALT1Q9Y5Z6 326 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 SLC30A1Q9Y6M5 507 aa6.33□□□□□ -1.4
ITGB1-208ENST00000464001 TCRBV16S1A1N1A0A5B0 115 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 SDHAP31040 664 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 ACVRL1P37023 503 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 RPS19P39019 145 aaKnown RBP6.32□□□□□ -1.4
ITGB1-208ENST00000464001 MOGSQ13724 837 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 TMEM132BQ14DG7 1078 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 TMEM200BQ69YZ2 307 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 GRAMD4Q6IC98 578 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 BRAPQ7Z569 592 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 C2orf69Q8N8R5 385 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 FAM89AQ96GI7 184 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 OR14A2Q96R54 314 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-208ENST00000464001 KIAA1683Q9H0B3 1180 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 OR10A2Q9H208 303 aa6.32□□□□□ -1.4
ITGB1-208ENST00000464001 GOLGA6L22H0YM25 854 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 ACO1P21399 889 aaKnown RBP6.31□□□□□ -1.4
ITGB1-208ENST00000464001 MRE11P49959 708 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 TBR1Q16650 682 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 FILIP1Q7Z7B0 1213 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 IGSF22Q8N9C0 903 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
ITGB1-208ENST00000464001 MATN2O00339 956 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 KCNA6P17658 529 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 APEX1P27695 318 aaKnown RBP6.3□□□□□ -1.4
ITGB1-208ENST00000464001 MAP3K12Q12852 859 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 FOXE3Q13461 319 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 NRN1LQ496H8 165 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 ZNF341Q9BYN7 854 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 NELFAQ9H3P2 528 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
ITGB1-208ENST00000464001 HMGA2P52926 109 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 IRF9Q00978 393 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 ARHGAP44Q17R89 818 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 FSTL4Q6MZW2 842 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 CC2D1AQ6P1N0 951 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-208ENST00000464001 RNF207Q6ZRF8 634 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 Q6ZSN1 163 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 FGD2Q7Z6J4 655 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 DDX53Q86TM3 631 aaKnown RBP6.29□□□□□ -1.4
ITGB1-208ENST00000464001 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-208ENST00000464001 BOCQ9BWV1 1114 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
ITGB1-208ENST00000464001 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 HS3ST3A1Q9Y663 406 aa6.29□□□□□ -1.4
ITGB1-208ENST00000464001 RASSF10A6NK89 507 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 B4E1Z4 1266 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 PLD2O14939 933 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 MAFO75444 373 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-208ENST00000464001 DUSP8Q13202 625 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 USP39Q53GS9 565 aaKnown RBP6.28□□□□□ -1.4
ITGB1-208ENST00000464001 CATSPEREQ5SY80 951 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 MAMDC4Q6UXC1 1216 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 OTOP1Q7RTM1 612 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 ZFPM1Q8IX07 1006 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 CFHR4Q92496 578 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 E2F7Q96AV8 911 aa6.28□□□□□ -1.4
ITGB1-208ENST00000464001 MRIQ9BWK5 157 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms