RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 KCNMB3Q9NPA1 279 aa18.29■□□□□ 0.52
COL1A1-202ENST00000463440 SQORQ9Y6N5 450 aa18.29■□□□□ 0.52
COL1A1-202ENST00000463440 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
COL1A1-202ENST00000463440 MYO9BQ13459 2157 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 WDR81Q562E7 1941 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 MAGEB2O15479 319 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 ZNF862O60290 1169 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 BAG4O95429 457 aaKnown RBP18.28■□□□□ 0.52
COL1A1-202ENST00000463440 C22orf31O95567 290 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 UGCGQ16739 394 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 B3GNT9Q6UX72 402 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 C8orf76Q96K31 380 aa18.28■□□□□ 0.52
COL1A1-202ENST00000463440 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 FAM205CA6NFA0 338 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 RBAK-RBAKDNI3L0D1 243 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 TAP1Q03518 808 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 PPP2R5CQ13362 524 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 SLFN12Q8IYM2 578 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 KIAA0319LQ8IZA0 1049 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 METTL13Q8N6R0 699 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 INSL6Q9Y581 213 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 SIP14410 1827 aa18.27■□□□□ 0.52
COL1A1-202ENST00000463440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-202ENST00000463440 TMOD1P28289 359 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 TOP1MTQ969P6 601 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 VAV3Q9UKW4 847 aa18.26■□□□□ 0.51
COL1A1-202ENST00000463440 EVPLQ92817 2033 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 DKC1O60832 514 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL1A1-202ENST00000463440 CD52P31358 61 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 PSMC5P62195 406 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 PAK2Q13177 524 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 HAS1Q92839 578 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 FTHL17Q9BXU8 183 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 AGO3Q9H9G7 860 aaKnown RBP18.25■□□□□ 0.51
COL1A1-202ENST00000463440 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
COL1A1-202ENST00000463440 GINS2Q9Y248 185 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 COL6A3P12111 3177 aa18.25■□□□□ 0.51
COL1A1-202ENST00000463440 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 EML1O00423 815 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 ARHGEF15O94989 841 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 UPP2O95045 317 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 IGFBP4P22692 258 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 CLCN3P51790 818 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
COL1A1-202ENST00000463440 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 CALCRLQ16602 461 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 ODR4Q5SWX8 454 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
COL1A1-202ENST00000463440 ZNF710Q8N1W2 664 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 ARNTL2Q8WYA1 636 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 YME1L1Q96TA2 773 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 NIFKQ9BYG3 293 aaKnown RBP18.24■□□□□ 0.51
COL1A1-202ENST00000463440 CERS4Q9HA82 394 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
COL1A1-202ENST00000463440 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 ENPP3O14638 875 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 NEMFO60524 1076 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 VTNP04004 478 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 P4HBP07237 508 aaKnown RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 QARSP47897 775 aaKnown RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 MCM2P49736 904 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 CRYBB1P53674 252 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 GNL2Q13823 731 aaKnown RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 ADGRE1Q14246 886 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 EPHA7Q15375 998 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 TARBP2Q15633 366 aaKnown RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 MTERF2Q49AM1 385 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 FBXO18Q8NFZ0 1043 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 FOXP1Q9H334 677 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-202ENST00000463440 AKT3Q9Y243 479 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
COL1A1-202ENST00000463440 LINC01553A4QN01 128 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 RPS6KA5O75582 802 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 STBD1O95210 358 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 NFX1Q12986 1120 aaKnown RBP18.22■□□□□ 0.51
COL1A1-202ENST00000463440 KIZQ2M2Z5 673 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 LRRC71Q8N4P6 559 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 TGS1Q96RS0 853 aaKnown RBP18.22■□□□□ 0.51
COL1A1-202ENST00000463440 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 SUGCTQ9HAC7 445 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 PCDHA12Q9UN75 941 aa18.22■□□□□ 0.51
COL1A1-202ENST00000463440 LOXHD1Q8IVV2 1947 aa18.21■□□□□ 0.51
COL1A1-202ENST00000463440 GPR182O15218 404 aa18.21■□□□□ 0.51
COL1A1-202ENST00000463440 GTPBP6O43824 516 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-202ENST00000463440 GPR32O75388 356 aa18.21■□□□□ 0.51
COL1A1-202ENST00000463440 ATP2B1P20020 1258 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms