RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 UPP2O95045 317 aa14.75□□□□□ -0.05
HDAC1-203ENST00000463172 TRMT1LQ7Z2T5 733 aaKnown RBP14.75□□□□□ -0.05
HDAC1-203ENST00000463172 SLFN12Q8IYM2 578 aa14.75□□□□□ -0.05
HDAC1-203ENST00000463172 NSUN7Q8NE18 718 aaKnown RBP14.75□□□□□ -0.05
HDAC1-203ENST00000463172 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
HDAC1-203ENST00000463172 LLPHQ9BRT6 129 aaKnown RBP14.75□□□□□ -0.05
HDAC1-203ENST00000463172 CERS4Q9HA82 394 aa14.75□□□□□ -0.05
HDAC1-203ENST00000463172 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
HDAC1-203ENST00000463172 GPR182O15218 404 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 C22orf31O95567 290 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 STAG3L1P0CL83 205 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 ATP4AP20648 1035 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 ERVK-21P61565 698 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 HMGN5P82970 282 aaKnown RBP14.74□□□□□ -0.05
HDAC1-203ENST00000463172 HTRA4P83105 476 aaPredicted RBP14.74□□□□□ -0.05
HDAC1-203ENST00000463172 CDC42EP1Q00587 391 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 PRKCEQ02156 737 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 TMEM62Q0P6H9 643 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
HDAC1-203ENST00000463172 C8orf34Q49A92 452 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 TMCO2Q7Z6W1 182 aaPredicted RBP14.74□□□□□ -0.05
HDAC1-203ENST00000463172 EXOC8Q8IYI6 725 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 ETNPPLQ8TBG4 499 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
HDAC1-203ENST00000463172 LMCD1Q9NZU5 365 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 GINS2Q9Y248 185 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 RWDD3Q9Y3V2 267 aa14.74□□□□□ -0.05
HDAC1-203ENST00000463172 TTC3P53804 2025 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-203ENST00000463172 LCHNA4D1U4 455 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 LINC01553A4QN01 128 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 ST18O60284 1047 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 RPS6KA5O75582 802 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 LARGE1O95461 756 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 MMP1P03956 469 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 FDPSP14324 419 aaKnown RBP14.73□□□□□ -0.05
HDAC1-203ENST00000463172 POU3F3P20264 500 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-203ENST00000463172 CD52P31358 61 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 DNM2P50570 870 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 CRYBB1P53674 252 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-203ENST00000463172 PSMC5P62195 406 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 TBC1D8BQ0IIM8 1120 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 ADGRE1Q14246 886 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 EFCAB12Q6NXP0 572 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 KIAA0319LQ8IZA0 1049 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 MICALL1Q8N3F8 863 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 ZBTB10Q96DT7 871 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 SEPT9Q9UHD8 586 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-203ENST00000463172 PADI3Q9ULW8 664 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 AKT3Q9Y243 479 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 KIF3AQ9Y496 699 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 CUL9Q8IWT3 2517 aa14.73□□□□□ -0.05
HDAC1-203ENST00000463172 A0A0C4DFX4 3053 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 ZBTB42B2RXF5 422 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 ENPP3O14638 875 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 SLC37A4O43826 429 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 EDIL3O43854 480 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 NFX1Q12986 1120 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 PPP2R5CQ13362 524 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 GNL2Q13823 731 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 RABEP1Q15276 862 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 DIS3L2Q8IYB7 885 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 FIBCD1Q8N539 461 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 OXER1Q8TDS5 423 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 C8orf76Q96K31 380 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 LRFN2Q9ULH4 789 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 PPME1Q9Y570 386 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
HDAC1-203ENST00000463172 RALGAPA2Q2PPJ7 1873 aa14.72□□□□□ -0.05
HDAC1-203ENST00000463172 COL4A6Q14031 1691 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 DENND3A2RUS2 1198 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 JAK2O60674 1132 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 QARSP47897 775 aaKnown RBP14.71□□□□□ -0.05
HDAC1-203ENST00000463172 NR5A1Q13285 461 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 SKIV2LQ15477 1246 aaKnown RBP14.71□□□□□ -0.05
HDAC1-203ENST00000463172 CCDC85BQ15834 202 aaPredicted RBP14.71□□□□□ -0.05
HDAC1-203ENST00000463172 PTPROQ16827 1216 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 AAK1Q2M2I8 961 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 KRT40Q6A162 431 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 NPAS4Q8IUM7 802 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 GJA10Q969M2 543 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 NIFKQ9BYG3 293 aaKnown RBP14.71□□□□□ -0.05
HDAC1-203ENST00000463172 AGO3Q9H9G7 860 aaKnown RBP14.71□□□□□ -0.05
HDAC1-203ENST00000463172 SUGCTQ9HAC7 445 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 C1orf112Q9NSG2 853 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 GJB4Q9NTQ9 266 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 THEGQ9P2T0 379 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 MTUS1Q9ULD2 1270 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 MTCH2Q9Y6C9 303 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 NLRC5Q86WI3 1866 aa14.71□□□□□ -0.05
HDAC1-203ENST00000463172 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms