RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-202ENST00000463060 ZNF286BP0CG31 522 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 CASP1P29466 404 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 NPEPPSP55786 919 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
COL6A1-202ENST00000463060 PNOCQ13519 176 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 CUL4BQ13620 913 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-202ENST00000463060 GNASQ5JWF2 1037 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 BBXQ8WY36 941 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-202ENST00000463060 SYAP1Q96A49 352 aaPredicted RBP15.99■□□□□ 0.15
COL6A1-202ENST00000463060 FAM167AQ96KS9 214 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
COL6A1-202ENST00000463060 LOXHD1Q8IVV2 1947 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 KLRC4O43908 158 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 HBP1O60381 514 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 GUCY2CP25092 1073 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 AMPD3Q01432 767 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 XKR9Q5GH70 373 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 PLA2G4FQ68DD2 849 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 PADI6Q6TGC4 694 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 DDX12PQ92771 950 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 ERCC4Q92889 916 aaPredicted RBP15.98■□□□□ 0.15
COL6A1-202ENST00000463060 ZNF333Q96JL9 665 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 RUSC1Q9BVN2 902 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 SPC25Q9HBM1 224 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 PPME1Q9Y570 386 aa15.98■□□□□ 0.15
COL6A1-202ENST00000463060 ARHGEF35A5YM69 484 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 CCL5P13501 91 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 MARK3P27448 753 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 GIT2Q14161 759 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
COL6A1-202ENST00000463060 LRRC41Q15345 812 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 GPBP1Q86WP2 473 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 CKAP2LQ8IYA6 745 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 DAW1Q8N136 415 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 CCDC34Q96HJ3 373 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 SH2D3AQ9BRG2 576 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 BLZF1Q9H2G9 400 aa15.97■□□□□ 0.15
COL6A1-202ENST00000463060 DHX33Q9H6R0 707 aaKnown RBP15.97■□□□□ 0.15
COL6A1-202ENST00000463060 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
COL6A1-202ENST00000463060 FRMPD3Q5JV73 1810 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 ARID2Q68CP9 1835 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 IGKV6-21A0A0C4DH24 114 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 NPHP3-ACAD11A0A0J9YXS1 232 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 PVALEFA0A1B0GWK0 134 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 FRMD3A2A2Y4 597 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 LETM1O95202 739 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 MYL3P08590 195 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 HOXC8P31273 242 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 PSEN2P49810 448 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 EHHADHQ08426 723 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 MAPK7Q13164 816 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 KCNA10Q16322 511 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 ZSCAN23Q3MJ62 389 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 CEP170P1Q96L14 293 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 GSDMAQ96QA5 445 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 TSEN34Q9BSV6 310 aaKnown RBP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 MTG1Q9BT17 334 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 XPNPEP1Q9NQW7 623 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 SEPT9Q9UHD8 586 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-202ENST00000463060 SCN10AQ9Y5Y9 1956 aa15.96■□□□□ 0.15
COL6A1-202ENST00000463060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-202ENST00000463060 ZEB2O60315 1214 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 MAFO75444 373 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-202ENST00000463060 ASGR1P07306 291 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 INSRRP14616 1297 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 ADAM17P78536 824 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 MFSD10Q14728 455 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 KIAA0753Q2KHM9 967 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 ZNF484Q5JVG2 852 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 MARCH8Q5T0T0 291 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 TRMT1LQ7Z2T5 733 aaKnown RBP15.95■□□□□ 0.14
COL6A1-202ENST00000463060 RNF180Q86T96 592 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 PCSK9Q8NBP7 692 aaKnown RBP15.95■□□□□ 0.14
COL6A1-202ENST00000463060 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 CRISPLD2Q9H0B8 497 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 RNF208Q9H0X6 261 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 COL1A2P08123 1366 aa15.95■□□□□ 0.14
COL6A1-202ENST00000463060 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 DGAT1O75907 488 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 SMC2O95347 1197 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 RPN1P04843 607 aaKnown RBP15.94■□□□□ 0.14
COL6A1-202ENST00000463060 BMP6P22004 513 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 ZNF131P52739 623 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 ACLYP53396 1101 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 MORC3Q14149 939 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 HIC1Q14526 733 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 KCNB1Q14721 858 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 CXCL17Q6UXB2 119 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 UNC13DQ70J99 1090 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms