RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	FAM86B1	E9PN63	330 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	CENPB	P07199	599 aa	Predicted RBP	12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	FAM86B2	P0C5J1	330 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	SLC26A2	P50443	739 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	RBM10	P98175	930 aa	Known RBP	12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	KRT76	Q01546	638 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	KCNC3	Q14003	757 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	NIPA1	Q7RTP0	329 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	POP1	Q99575	1024 aa	Known RBP	12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	RGS18	Q9NS28	235 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	BARHL2	Q9NY43	387 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	VPS13A	Q96RL7	3174 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	KMT2E	Q8IZD2	1858 aa		12.74	□□□□□ -0.37
PTPN7-204	ENST00000462815	COL1A2	P08123	1366 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	FSCN2	O14926	492 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	C22orf31	O95567	290 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	FOS	P01100	380 aa	Predicted RBP	12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	STAG3L1	P0CL83	205 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	KLRC1	P26715	233 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	CDC27	P30260	824 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	NRIP1	P48552	1158 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	NAPA	P54920	295 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	FAM189B	P81408	668 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	AP3B2	Q13367	1082 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	DSC3	Q14574	896 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	ADCK5	Q3MIX3	580 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	BMP8A	Q7Z5Y6	402 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	RASEF	Q8IZ41	740 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	LINC01465	Q8N7H1	131 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	SUSD6	Q92537	303 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	EDA	Q92838	391 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	TCEANC2	Q96MN5	208 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	SDF4	Q9BRK5	362 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	UPF3B	Q9BZI7	483 aa	Known RBP	12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	CWH43	Q9H720	699 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	RNF19A	Q9NV58	838 aa		12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	RBM28	Q9NW13	759 aa	Known RBP	12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.73	□□□□□ -0.37
PTPN7-204	ENST00000462815	hCG_1984214	I3L0E3	225 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815		M0QZ92	97 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	EDIL3	O43854	480 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	HBP1	O60381	514 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	GPR32	O75388	356 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	CYP3A4	P08684	503 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	NDUFV1	P49821	464 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	MRE11	P49959	708 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	ADCY7	P51828	1080 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	IRX6	P78412	446 aa	Predicted RBP	12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	TSGA10IP	Q3SY00	556 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	FAM102B	Q5T8I3	360 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	FAM228A	Q86W67	206 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	ZNF713	Q8N859	430 aa	Predicted RBP	12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	PRSS33	Q8NF86	280 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	ST3GAL5	Q9UNP4	418 aa		12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	USP15	Q9Y4E8	981 aa	Predicted RBP	12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815		V9GY48	417 aa	Predicted RBP	12.72	□□□□□ -0.37
PTPN7-204	ENST00000462815	NID2	Q14112	1375 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	SMCO2	A6NFE2	343 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	ERVFC1	P60507	584 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	UBE3A	Q05086	875 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	RTN1	Q16799	776 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	DUSP6	Q16828	381 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	RBM23	Q86U06	439 aa	Known RBP	12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	TNPO1	Q92973	898 aa	Known RBP	12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	LENG9	Q96B70	501 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	PHOX2B	Q99453	314 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	ADAM2	Q99965	735 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	ANO2	Q9NQ90	1003 aa		12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.71	□□□□□ -0.37
PTPN7-204	ENST00000462815	DDX39A	O00148	427 aa	Known RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	PER2	O15055	1255 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZBTB43	O43298	467 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	RPS6KA5	O75582	802 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	FGF18	O76093	207 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	CRYBB1	P53674	252 aa	Predicted RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZXDA	P98168	799 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	NFX1	Q12986	1120 aa	Known RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	PKN1	Q16512	942 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	PFKFB3	Q16875	520 aa	Predicted RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	KIZ	Q2M2Z5	673 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF484	Q5JVG2	852 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	IER5L	Q5T953	404 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	TMEM184A	Q6ZMB5	413 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	LRRC55	Q6ZSA7	311 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	TRIM67	Q6ZTA4	783 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	SLC24A5	Q71RS6	500 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	DHX32	Q7L7V1	743 aa	Known RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	SKAP1	Q86WV1	359 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	COLGALT1	Q8NBJ5	622 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	NEK1	Q96PY6	1258 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	OSMR	Q99650	979 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	S1PR5	Q9H228	398 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	ELAC1	Q9H777	363 aa	Known RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF302	Q9NR11	478 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	TLR9	Q9NR96	1032 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	C1orf112	Q9NSG2	853 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	TYW1	Q9NV66	732 aa	Known RBP	12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	TMEM161A	Q9NX61	479 aa		12.7	□□□□□ -0.38
PTPN7-204	ENST00000462815	WDR81	Q562E7	1941 aa		12.69	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms